Gene Pput_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3443 
SymbolcysB 
ID5193637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3848123 
End bp3849097 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content60% 
IMG OID640587891 
Producttranscriptional regulator CysB 
Protein accessionYP_001268753 
Protein GI148548651 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0457028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00255719 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCTTC AACAACTGCG CTACATCTGG GAAGTGGCGC ACCATGACCT CAACGTCTCC 
GCGACGGCGC AGAGCCTGTA TACCTCCCAG CCAGGTATCA GCAAGCAGAT CCGCCTGCTC
GAAGACGAAT TGGGTGTTGA AGTCTTTGCC CGCAGCGGCA AGCATCTGAC CCGCGTGACC
CCGGCCGGTG AGCGCATCAT CAATACCGCA GGCGAAATCC TGCGCAAGGT CGAGAGCATC
AAGCAGATTG CCCAAGAGTT CTCCAACGAG AAGAAGGGCA CGCTGTCCAT CGCCACCACC
CACACCCAGG CGCGCTACGC GTTGCCGCCG GTTATCAGCA GCTTTATCAA GCAGTATCCG
GAGGTGTCCC TGCACATGCA TCAGGGTTCG CCCATGCAGA TTGCCGAGAT GGCTGCGGAC
GGTACGGTCG ATTTCGCCAT CGCCACCGAG GCGCTGGAGC TGTTCGGCGA TCTGATCATG
ATGCCGTGCT ACAAGTGGAA CCGTTGCGTT GTGGTGCCGC AGGGGCACCC GCTGGCCAAG
CTGCCGAAAC TGACCCTGGA AGCCGTCGCC GAGTACCCGA TCGTCACCTA CGTGTTCGGT
TTCACCGGGC GCTCAAAGCT GGATGAGGCT TTCAATCACC GTGGCCTCAC GCCAAAGGTG
GTCTTCACCG CGGCTGACGC CGACGTGATC AAGACGTATG TGCGCCTGGG GCTGGGCGTG
GGTATCGTTG CCGGCATGGC TGTGGACGCC AAGCTCGACA GTGACTTGGT GGCGCTGGAT
GCCAGTGAGC TGTTCGAAGC CAGCATCACC AAGATCGGCT TCCGTCGGGG TACCTTCCTG
CGCGGCTTCA TGTGCGACTT CATTGAGAAG TTTGCCCCGC ACCTGACCCG TGAAGTGATG
GCCAAGGCCA TTCAGTGCCA TAACAAGCAA GAGCTGGAAG CGTTGTTCGA AGGTGTCGAG
CTGCCGGTTC ACTGA
 
Protein sequence
MKLQQLRYIW EVAHHDLNVS ATAQSLYTSQ PGISKQIRLL EDELGVEVFA RSGKHLTRVT 
PAGERIINTA GEILRKVESI KQIAQEFSNE KKGTLSIATT HTQARYALPP VISSFIKQYP
EVSLHMHQGS PMQIAEMAAD GTVDFAIATE ALELFGDLIM MPCYKWNRCV VVPQGHPLAK
LPKLTLEAVA EYPIVTYVFG FTGRSKLDEA FNHRGLTPKV VFTAADADVI KTYVRLGLGV
GIVAGMAVDA KLDSDLVALD ASELFEASIT KIGFRRGTFL RGFMCDFIEK FAPHLTREVM
AKAIQCHNKQ ELEALFEGVE LPVH