Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3443 |
Symbol | cysB |
ID | 5193637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3848123 |
End bp | 3849097 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640587891 |
Product | transcriptional regulator CysB |
Protein accession | YP_001268753 |
Protein GI | 148548651 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0457028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00255719 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGCTTC AACAACTGCG CTACATCTGG GAAGTGGCGC ACCATGACCT CAACGTCTCC GCGACGGCGC AGAGCCTGTA TACCTCCCAG CCAGGTATCA GCAAGCAGAT CCGCCTGCTC GAAGACGAAT TGGGTGTTGA AGTCTTTGCC CGCAGCGGCA AGCATCTGAC CCGCGTGACC CCGGCCGGTG AGCGCATCAT CAATACCGCA GGCGAAATCC TGCGCAAGGT CGAGAGCATC AAGCAGATTG CCCAAGAGTT CTCCAACGAG AAGAAGGGCA CGCTGTCCAT CGCCACCACC CACACCCAGG CGCGCTACGC GTTGCCGCCG GTTATCAGCA GCTTTATCAA GCAGTATCCG GAGGTGTCCC TGCACATGCA TCAGGGTTCG CCCATGCAGA TTGCCGAGAT GGCTGCGGAC GGTACGGTCG ATTTCGCCAT CGCCACCGAG GCGCTGGAGC TGTTCGGCGA TCTGATCATG ATGCCGTGCT ACAAGTGGAA CCGTTGCGTT GTGGTGCCGC AGGGGCACCC GCTGGCCAAG CTGCCGAAAC TGACCCTGGA AGCCGTCGCC GAGTACCCGA TCGTCACCTA CGTGTTCGGT TTCACCGGGC GCTCAAAGCT GGATGAGGCT TTCAATCACC GTGGCCTCAC GCCAAAGGTG GTCTTCACCG CGGCTGACGC CGACGTGATC AAGACGTATG TGCGCCTGGG GCTGGGCGTG GGTATCGTTG CCGGCATGGC TGTGGACGCC AAGCTCGACA GTGACTTGGT GGCGCTGGAT GCCAGTGAGC TGTTCGAAGC CAGCATCACC AAGATCGGCT TCCGTCGGGG TACCTTCCTG CGCGGCTTCA TGTGCGACTT CATTGAGAAG TTTGCCCCGC ACCTGACCCG TGAAGTGATG GCCAAGGCCA TTCAGTGCCA TAACAAGCAA GAGCTGGAAG CGTTGTTCGA AGGTGTCGAG CTGCCGGTTC ACTGA
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Protein sequence | MKLQQLRYIW EVAHHDLNVS ATAQSLYTSQ PGISKQIRLL EDELGVEVFA RSGKHLTRVT PAGERIINTA GEILRKVESI KQIAQEFSNE KKGTLSIATT HTQARYALPP VISSFIKQYP EVSLHMHQGS PMQIAEMAAD GTVDFAIATE ALELFGDLIM MPCYKWNRCV VVPQGHPLAK LPKLTLEAVA EYPIVTYVFG FTGRSKLDEA FNHRGLTPKV VFTAADADVI KTYVRLGLGV GIVAGMAVDA KLDSDLVALD ASELFEASIT KIGFRRGTFL RGFMCDFIEK FAPHLTREVM AKAIQCHNKQ ELEALFEGVE LPVH
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