Gene Pput_3428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3428 
Symbol 
ID5193211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3828816 
End bp3829172 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content60% 
IMG OID640587876 
Productputative 6-pyruvoyl tetrahydropterin synthase 
Protein accessionYP_001268738 
Protein GI148548636 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAATTT TCAAGGAATT CACATTCGAA TCGGCCCACC GCCTGCCCCA CGTCCCTGAA 
GGGCACAAAT GCGGCCGTTT GCATGGCCAC TCGTTCAAGG TCGGCCTGCA CCTGACCGGC
CCGCTCGACC CGCACACGGG CTGGATCCGC GACTTCGCCG AGGTCAAGGC GATCTTCAAG
CCGATCTATG ATCAGCTGGA CCACAACTAC CTGAACGACA TCCCCGGCCT GGAGAACCCC
ACCAGCGAAG TGATCGCCAA GTGGATCTGG GACCAGGTCA AGCCGCTGAT GCCGGAGCTG
TCGAAGGTCC GTATTCATGA AACCTGCACC AGCGGCTGCG AATACAGCGG CGATTGA
 
Protein sequence
MEIFKEFTFE SAHRLPHVPE GHKCGRLHGH SFKVGLHLTG PLDPHTGWIR DFAEVKAIFK 
PIYDQLDHNY LNDIPGLENP TSEVIAKWIW DQVKPLMPEL SKVRIHETCT SGCEYSGD