Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3428 |
Symbol | |
ID | 5193211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3828816 |
End bp | 3829172 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640587876 |
Product | putative 6-pyruvoyl tetrahydropterin synthase |
Protein accession | YP_001268738 |
Protein GI | 148548636 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0720] 6-pyruvoyl-tetrahydropterin synthase |
TIGRFAM ID | [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein [TIGR03367] queuosine biosynthesis protein QueD |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAATTT TCAAGGAATT CACATTCGAA TCGGCCCACC GCCTGCCCCA CGTCCCTGAA GGGCACAAAT GCGGCCGTTT GCATGGCCAC TCGTTCAAGG TCGGCCTGCA CCTGACCGGC CCGCTCGACC CGCACACGGG CTGGATCCGC GACTTCGCCG AGGTCAAGGC GATCTTCAAG CCGATCTATG ATCAGCTGGA CCACAACTAC CTGAACGACA TCCCCGGCCT GGAGAACCCC ACCAGCGAAG TGATCGCCAA GTGGATCTGG GACCAGGTCA AGCCGCTGAT GCCGGAGCTG TCGAAGGTCC GTATTCATGA AACCTGCACC AGCGGCTGCG AATACAGCGG CGATTGA
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Protein sequence | MEIFKEFTFE SAHRLPHVPE GHKCGRLHGH SFKVGLHLTG PLDPHTGWIR DFAEVKAIFK PIYDQLDHNY LNDIPGLENP TSEVIAKWIW DQVKPLMPEL SKVRIHETCT SGCEYSGD
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