Gene Pput_3340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3340 
Symbol 
ID5195333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3763528 
End bp3763989 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content62% 
IMG OID640587787 
Productresponse regulator receiver protein 
Protein accessionYP_001268650 
Protein GI148548548 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGC CCATTCTGCT GGTCGAAGAC AATCCCCGAG ACCTGGAGCT GACCCTGCTG 
GCCCTGGAGC GCAGCCAGTT GGCCAACGAG GTCATCGTGC TGCGTGACGG CGCCGATGCG
CTCGACTACT TGCTGCGCCG CAACGCCTAT GCCGAGCGCG ATGACGGCAA CCCTGCCGTG
CTGTTACTCG ACCTGAAACT GCCTAAGGTC GACGGCCTGG AAGTGCTCAA GGAAGTGCGC
GCCACTGCCG AACTGCGCAG CATCCCCACC GTGATGCTGA CCTCTTCGCG CGAAGAGCCC
GACCTGCTGC GCGCCTACGA GCTGGGGGTA AACGCTTATG TGGTCAAACC CGTGGAGTTC
AAGGAATTCG TCACCGCCAT CTCCGACCTC GGGGTATTCT GGGCAGTGCT AAACGAACCG
CCACCCGGCT CACTGCGACT GAACCGTCGC GGTAGCAACT GA
 
Protein sequence
MLKPILLVED NPRDLELTLL ALERSQLANE VIVLRDGADA LDYLLRRNAY AERDDGNPAV 
LLLDLKLPKV DGLEVLKEVR ATAELRSIPT VMLTSSREEP DLLRAYELGV NAYVVKPVEF
KEFVTAISDL GVFWAVLNEP PPGSLRLNRR GSN