Gene Pput_3337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3337 
Symbol 
ID5191072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3759904 
End bp3760440 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content64% 
IMG OID640587784 
Productspore coat U domain-containing protein 
Protein accessionYP_001268647 
Protein GI148548545 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.535798 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCA CTTCGATCCT GTTGCTCACC CTCGGCCCGC TGCTGGTCCC CGGCGGTGCG 
GTGCATGGCA GCACCACCGG TTTCATCCAG GCGCGGCTGG TGATCAGCGC GTCTTGCCAG
ATCAGCAGCA ACGAGACGCA ACCGGCTGTG CTGGGTGACC CAGGCGTACT GGACTTTGGC
GAGCGCGGTC CCAACTGGGA TCAGCCGTTG CGCAGCCAGG TGGACGAAGT GGGCGGTCAG
GGTAGCCTGC AGATCAGTTG CACGCCTGAG GTTCGGGCAT TCAACGTGCG TATCAATGGT
GGCCTCAATG GCGACGATGG CATTCGCCGC CTGAGCAACG GCCGTGAACT GATTCCTTAT
CAGCTGGCGG TCGACCCAGG CGGTAACAGC CGCTACGGCG TCGGCCAGGC GCGGGCCTTC
ACCATTCGCA GCAGCCAGCA AGTACCGATT CCCATCTACG GTGTGGTAGT GGCGCAACCG
CGTGCGCTGC CGGCCGGGCT TTACCGCGAC ACCCTCAGAG TGACCCTGGA CTGGTAA
 
Protein sequence
MSRTSILLLT LGPLLVPGGA VHGSTTGFIQ ARLVISASCQ ISSNETQPAV LGDPGVLDFG 
ERGPNWDQPL RSQVDEVGGQ GSLQISCTPE VRAFNVRING GLNGDDGIRR LSNGRELIPY
QLAVDPGGNS RYGVGQARAF TIRSSQQVPI PIYGVVVAQP RALPAGLYRD TLRVTLDW