Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3331 |
Symbol | |
ID | 5195233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3753429 |
End bp | 3754577 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640587778 |
Product | peptidase M14, carboxypeptidase A |
Protein accession | YP_001268641 |
Protein GI | 148548539 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2866] Predicted carboxypeptidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.7125 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGTGA CGCTGTCCCC CCTGCAGATC GACTGCGATT TCGACTCCGG CAACATACAG GTACTGGATG CCAGCAACCC GGCCCAGGTA CACCTGGCCA TTCGCCCGGA CACCCACAGC GGCCACTACC AGTGGTTCCA CTTCAAGGTC AGCGGGCTCA CACCGGGGCA GGTCCATCGC TTCAGCCTGG ACAACGCTTC TGGCTCCTCG TACAAGAACG CGTGGAGCGG CTACAACGCT GTGGCCAGCT ACGACCAGCA GCGCTGGTTC CGCGTGCCCA GCCAGTTCGA CGGTACGGCG CTATCGTTCG AGGTCAAGGC TGAACAGGAC CAGATCTGGT TCGCCTATTT CGAGCCCTAC CCGCGTGCCC GCCACAACCA GCTGATCGAA CGCGCCCGCC AACTCCAGGG GGTCGAGTTG CTGGCCAGCG GCCGCAGTAT CCAGGGCCGC GATATCCCGC TGCTGCGGGC AGGCGACGGT GCCGAAGGCA AGCGCAAGCT GTGGTTGATT GCCCAGCAGC ACCCGGGCGA ACACATGGCC GAATGGTTCA TGGAAGGCGT GATCGACCGC CTGCAGGCCA ACGACGCGGT GGTCCAGCAA TTGCTGGCCA AGGCCGACCT TTATCTGATC CCCAACATGA ACCCCGACGG CGCCTTCCTC GGCCACCTGC GCACCAACTT CAAAGGCAAG GACCTCAACC GCGCCTGGCA GGACGCCAGC GTCGAATTCA GCCCGGAAGT GTTCTTTGCA CAGGCGCAGA TGAAGCAGTA CGGTGTAGAT GCCTTCATCG ACGTGCACGG TGACGAAGAA ATCCCCCACG TGTTCACGGC TGCATGCGAG GGCAACCCGG GTTACACCCC TCGGCTGGCC AAACTCGAAG AGCAGTTCCG TAGCACCTTG TGCAGCCTGA CCCGCGACTT CCAGACGGTG CATGGCTATA CCCGTGACGA ACCCGGACAG GCGAACACGA CGCTGGCCTG CAATGCGGTG GGCATGGCCC ATGACTGCCT GTCACTGACG CTGGAGATGC CGTTCAAGGA CCATGACGAC GCGCCCGATG CAGTCACCGG GTGGTCGGGG GCGCGCTCGA AGGCACTGGC CGGGGCGGTG CTGGAGACCT TGGCCAGCAT GGTTGGCGAT TTGCGCTGA
|
Protein sequence | MTVTLSPLQI DCDFDSGNIQ VLDASNPAQV HLAIRPDTHS GHYQWFHFKV SGLTPGQVHR FSLDNASGSS YKNAWSGYNA VASYDQQRWF RVPSQFDGTA LSFEVKAEQD QIWFAYFEPY PRARHNQLIE RARQLQGVEL LASGRSIQGR DIPLLRAGDG AEGKRKLWLI AQQHPGEHMA EWFMEGVIDR LQANDAVVQQ LLAKADLYLI PNMNPDGAFL GHLRTNFKGK DLNRAWQDAS VEFSPEVFFA QAQMKQYGVD AFIDVHGDEE IPHVFTAACE GNPGYTPRLA KLEEQFRSTL CSLTRDFQTV HGYTRDEPGQ ANTTLACNAV GMAHDCLSLT LEMPFKDHDD APDAVTGWSG ARSKALAGAV LETLASMVGD LR
|
| |