| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3328 |
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| Symbol | |
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| ID | 5193377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3749895 |
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| End bp | 3751082 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640587775 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001268638 |
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| Protein GI | 148548536 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.933916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCTC AAACAATGAG ACCCGGCCGC GTGCTCTTCG CGTTGGCCAT TGGCGCCTTT
GGCATCGGCA CTACCGAGTT CACCCCGATG GGGCTACTGC CAGTCATCGC CCAGGGCGTG
GAGGTGAGCA TCCCCAGCGC CGGTATGCTG ATCACCGCCT ATGCCATTGG CGTGATGGTC
GGCGCGCCGA TCATGACCTT GCTGTTCAGC CGCTTTGGGA AGCGCGCTGC GCTGATGGCG
CTGATGGCCA TCTTCACCCT TGGTAACCTG CTGTCGTCAC TGTCGCCGGA CTACTACACC
CTGCTCGCTT CGCGGCTGGT CACCAGCCTC AACCATGGTG CGTTCTTCGG CCTGGGAGCC
GTGGTGGCAG CCAGCGTGGT GCCCAAGGAG AAACAGGCCA GCGCCGTGGC CACCATGTTC
ATGGGCCTGA CCATCGCCAA CATCGGCGGC GTGCCGGCCG CCACCTGGAT TGGCCAGCAG
ATCGGCTGGC GCATGGCATT TGCCGGTACC GCCGTACTTG GCCTGCTGGC CATGGCCGCG
CTGTGGTACG CCCTGCCCAA GGGTGAACGC GGCAGCGTGC CGCATGTGCG CCAGGAACTG
GCGGTCATTG CCCGCCCCAG CGTGCTGCTG GCAATGGCCA CCACCGTGCT CGGTGCCGGT
GCCATGTTCA CCTTGTACAC CTACGTGGCG CCGGTGCTGG CCGAACTGAC CGGTGCCTCG
GACGGCTTCG TAACCTTGGG ACTGGTACTG ATCGGGGTTG GCTTCACCCT TGGCAACAGC
CTGGGTGGCC GCCTGGCCGA CTGGTCACTG GATGGCGCGG CGAAAATCTT CCTCGCCGTG
CTGGCGCTGA TCATGCTGGC GATGCCCCTG GTACTGGGTA GCCACCTTGG CGCAGCCATC
GCCCTGCTGG TCTGGGGCAT GTTCACCTTC GCCGTGGTAC CACCGCTGCA AATGCGTGTA
ATGACTGCCG CCATCGAGGC ACCAGGCCTG GCGTCGTCGA TCAACGTGGG TGCGTTCAAC
CTGGGTAACG CCGTGGGCGC GGCGCTGGGT GGTGCGGTTA TCAGCCTGAA CCTGGGCTAC
GCCGCCGTGC CGATGGCCGG AGGTGTGCTG GCAGCTGCGG GGCTGTTGCT GGTATGGCTG
GGCGGGCGCC ACAAGGTCGC CGGCAAGACC GCAGCCGATA TGGCCTGA
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| Protein sequence | MTAQTMRPGR VLFALAIGAF GIGTTEFTPM GLLPVIAQGV EVSIPSAGML ITAYAIGVMV
GAPIMTLLFS RFGKRAALMA LMAIFTLGNL LSSLSPDYYT LLASRLVTSL NHGAFFGLGA
VVAASVVPKE KQASAVATMF MGLTIANIGG VPAATWIGQQ IGWRMAFAGT AVLGLLAMAA
LWYALPKGER GSVPHVRQEL AVIARPSVLL AMATTVLGAG AMFTLYTYVA PVLAELTGAS
DGFVTLGLVL IGVGFTLGNS LGGRLADWSL DGAAKIFLAV LALIMLAMPL VLGSHLGAAI
ALLVWGMFTF AVVPPLQMRV MTAAIEAPGL ASSINVGAFN LGNAVGAALG GAVISLNLGY
AAVPMAGGVL AAAGLLLVWL GGRHKVAGKT AADMA
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