Gene Pput_3297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3297 
Symbol 
ID5190594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3706632 
End bp3707465 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content61% 
IMG OID640587744 
Producthypothetical protein 
Protein accessionYP_001268607 
Protein GI148548505 
COG category[S] Function unknown 
COG ID[COG3220] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.867164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCCTG CGATGTTGAA CATCGGGCTA GGCTTGCGTC GCGGCCTGTT GCCGGAACTG 
CTGGCCATGG AGGCGGGTGC AGTGGACTTT CTCGAGTGTG CGCCGGAAAA CTGGATTGCC
GTGGGCGGCG CCTATGGCAA GGGCTTGGCC CAGTTGGCGG AGCGCTTTGC TGTCACCTGT
CATGGGTTGT CTTTATCGCT GGGTGGCAGT GCCCCGCTGG ATCGCCATTT CCTTGAGCAG
ACCCGGCAGT TTCTCGATCG ATACCATGTG CGACTGTACA GCGAGCACCT GAGCTACTGC
AGTGATGACG GGCACCTGTA CGACCTGATG CCCATCCCGT TCACCGATGA AGCCGTACAC
CATGTGGCCG CGCGCATACG CCAGGCTCAG GAGCAGCTGG AGCGGCGCAT TGCCGTGGAG
AACATCAGCT ACTACGCCGC GCCGTATCAG GCGATGAGCG AACTCGACTT CATCCAGGCG
GTGCTCGAAG AGGCGGATTG TGACCTGCTG CTGGACGTCA ACAATGTCTA TGTCAACGCC
TGCAACCATG GCTACGACGC CCAGCAATTC CTTGCAGGCT TGCCCCCGGC GCGCGTGACC
GGGATGCACG TTGCCGGGCA TTACGATGAA GCGCCGGACC TCAAAGTGGA TACCCATGGG
GCCGCCGTGA AGGAGGATGT CTGGACGCTG TACGCCAGCG CTTGCGTGCG CTTTGGCGTA
AAGCCGACGG TGCTTGAGCG TGATTTCAAC TACCCGCCCT TGGCCGAACT GTTGGCCGAG
ACGGCGCGTA TGCGTGCTGT GCAAAGCGCT GCCGGAGGGC AAGCAGATGA ATGA
 
Protein sequence
MFPAMLNIGL GLRRGLLPEL LAMEAGAVDF LECAPENWIA VGGAYGKGLA QLAERFAVTC 
HGLSLSLGGS APLDRHFLEQ TRQFLDRYHV RLYSEHLSYC SDDGHLYDLM PIPFTDEAVH
HVAARIRQAQ EQLERRIAVE NISYYAAPYQ AMSELDFIQA VLEEADCDLL LDVNNVYVNA
CNHGYDAQQF LAGLPPARVT GMHVAGHYDE APDLKVDTHG AAVKEDVWTL YASACVRFGV
KPTVLERDFN YPPLAELLAE TARMRAVQSA AGGQADE