Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3264 |
Symbol | |
ID | 5190853 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3671732 |
End bp | 3672661 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640587711 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001268574 |
Protein GI | 148548472 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.655884 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATGC TGCGCATCAC CGACCTCGAA CTGTTTGCCC GCAGCAGCGT GCTGGGTAGC TTCACTGCCG CCGCCCATGA AGCCGGCCTG CTGCCGGGCC AGGTGGCTGC CGCGATCAAA CGTCTGGAAC GCGACCTGGA TGTACGCCTG TTCGCCCGCA CCACCCGCAG CCTGCGCCTG ACCGCCGAGG GCGAGCGCTA CCTGCCAACC GCGCTGAATG TGCTGGAAAG CCTGCGCCAG GGCCATGAAG ATCTGCATGG CAACCCCAAT AGCCTGCGCG GCACCCTGCA GGTGTCGGCG CCTTCCGACA TGGGCCGCAA CATGTTGTTG CCCTGGCTCA GCGCCTTCCG CCACGACCAC CCGGCATTGC AACTGCGCTT CTTCCTGTCC GACCAGATGG CCGACCTCAA CCGCGACCCT GTGGATGTGG CCATCCGCTA TGGCCTCAAC CAGGATGCCA ACTACATCGC CCTGCCACTG GCCGAATGGA ACCGCCGCGT GCTGGTGGCC TCGCCCGACT ACCTGGCCCG CCACGGCCGC CCGCTTACCC CCGACGCACT GCAGCAGCAT GCCTGCCTGC TGTACATGCA GCACAGCCGG GTGTACGACA AGTGGCAGCT GGGTAATCGC ACCGTGCAGG TGCGTGGGCC GCTGGTCAGT GACGATGCCG ACGTCATCCG CCGCCTGGCC ATCCAGGGGG AAGGTATCGT CTACAAGTCG TGGCTGGATG TCAGCGCCAA CATCGCGGCC GGTGAACTGG AAATGGTCCT GCCCGAATTG CTCGGCGAGC CTACCCCGCT GACCTTGGTC TGCCCTCATC GCAAACAACT CACACCGGCC GTGAAGCAAT TGCACCTGTG GCTACGCGAA CGCTTCGAGG CCCTGCGCGC CCGGGCACTG ACCAACGGCT GCACAATCGT TCCAGACTGA
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Protein sequence | MKMLRITDLE LFARSSVLGS FTAAAHEAGL LPGQVAAAIK RLERDLDVRL FARTTRSLRL TAEGERYLPT ALNVLESLRQ GHEDLHGNPN SLRGTLQVSA PSDMGRNMLL PWLSAFRHDH PALQLRFFLS DQMADLNRDP VDVAIRYGLN QDANYIALPL AEWNRRVLVA SPDYLARHGR PLTPDALQQH ACLLYMQHSR VYDKWQLGNR TVQVRGPLVS DDADVIRRLA IQGEGIVYKS WLDVSANIAA GELEMVLPEL LGEPTPLTLV CPHRKQLTPA VKQLHLWLRE RFEALRARAL TNGCTIVPD
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