Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3259 |
Symbol | |
ID | 5195272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3667515 |
End bp | 3668438 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640587706 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001268569 |
Protein GI | 148548467 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.48256 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.503791 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTTA GCAAGGTCGA CCTCAACCTG TTCATCGTGT TCGATGCGAT CTACACCGAA GCCAACCTGA CCCGCGCCGG GCAGATCGTC GGCATTACCC AGCCGGCAGT GTCCAATGCC CTGTCGCGCC TGCGCGAAAC CTTCAATGAC CCGCTGTTCG TGCGCACTGC GCAAGGCATG GTGCCCACCC CCATGGCGCA GAACATCATC GGCCCTGTGC GCAACGCGCT GGCGCTGCTG CGGACTTCGG TGCAGGAAAG CCGCATTTTC AATCCGCAGC AGGCCAACAA GACCTTCCGC ATCAGCATGA CCGACCTGAC CGAGGCGGTC ATCCTGCCGC CGCTGTTCCA GCGCCTGCGC CGCCTGGCGC CGGCAGTCAT GATCGAAAGC TTCCTGTGCA AGCGCCGCGA GACCACCAAG GAACTCGCGG CCGGCCGCCT GGACTTTGCC ATCGACGCGC CACTGAACAC CGACCCGCAG GTGCGCCACA TCAAACTGAT GCAAGACCGC TATGTCTGCG CCCTGCGCCA GGGTCACCCG CTGGCCGACA GCAAGCTGAC CCTCGACAGC TACCTGGGCA TGACCCACAT CCATATCTCC AGCCGCCGCA ACGGCCTGGG TTACGTCGAC CTGGCGCTGG GCAAGATGGG GGTTCAACGC AAGGTCGCCC TGCGTTCGCA ACACTACCTG ATGGCGTCGC AGGTGTTGCA GCAGACCGAC ATGGCGATGA CGGTCCCCGA GCGCTTCGCC CGTCGCCATC AGTTGCGTTA TCAGGCGCTG CCGGTGGAGG TCCCTGCGCT GGAAACGCAC CTGTACTGGC ATGAAAGCAC CGACCAGGAC CCGGCCAACC GCTGGATGCG CGAGCAGATT ACGGAATTGT GCGAGCGCGT GGTTGCAGAG GAAGAGAAGG CTCTGGAGCC CTGA
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Protein sequence | MNLSKVDLNL FIVFDAIYTE ANLTRAGQIV GITQPAVSNA LSRLRETFND PLFVRTAQGM VPTPMAQNII GPVRNALALL RTSVQESRIF NPQQANKTFR ISMTDLTEAV ILPPLFQRLR RLAPAVMIES FLCKRRETTK ELAAGRLDFA IDAPLNTDPQ VRHIKLMQDR YVCALRQGHP LADSKLTLDS YLGMTHIHIS SRRNGLGYVD LALGKMGVQR KVALRSQHYL MASQVLQQTD MAMTVPERFA RRHQLRYQAL PVEVPALETH LYWHESTDQD PANRWMREQI TELCERVVAE EEKALEP
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