Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3255 |
Symbol | |
ID | 5191642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3662413 |
End bp | 3663975 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640587702 |
Product | alkyl hydroperoxide reductase subunit F |
Protein accession | YP_001268565 |
Protein GI | 148548463 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3634] Alkyl hydroperoxide reductase, large subunit |
TIGRFAM ID | [TIGR03140] alkyl hydroperoxide reductase, F subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.979482 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGGACG CCACGCTTAA ATCGCAACTG AAAACCTACC TGGAGCGGGT CACCCAGCCG ATCGAGATCG TTGCTTCCCT CGACGACGGC GCGAAGTCCC GCGAATTGCA CGACCTGCTG GTAGAGATTG CCAGCCTGTC GAACCTCATT ACCTTCAGCG CGGACGGTAC CGATGCCCGT CGCCCTTCAT TCTCGCTGAA CCGCCCGGGT GCCGATATCA GCCTGCGCTT CGCCGGCATT CCCATGGGCC ACGAGTTCAC CTCGCTGGTG CTGGCACTGC TGCAAGTGGG TGGCCACCCG TCAAAGGCCA GTGTCGAAGT GATCGAGCAG ATCCAGGCCC TGGAAGGTGA ATTCAACTTC GAAACCTACT TCTCGCTGTC GTGCCAGAAC TGCCCGGACG TCGTCCAGGC ACTGAACCTG ATGGCGGTAC TCAACCCCAA CGTGCGCCAT GTTGCCATCG ACGGTGCGCT GTTCCAGGAC GAAGTGGAAT CGCGCAAGAT CATGGCGGTT CCGAGTATCT ACCTCAACGG TGAAGTGTTT GGTCAGGGCC GTATGGGCCT GGAAGAAATC ATTGGCAAGA TCGACACCAA CGCTGGCGCC CGCCAGGCCG AGAAGATCAA CGCCAAGGAA GCCTTTGACG TGCTGGTTGT CGGCGGTGGC CCCGCTGGCG CCGCTGCTGC TATCTACGCT GCCCGCAAGG GCATCCGTAC CGGTGTTGCC GCCGAGCGCT TCGGCGGCCA GGTGCTGGAC ACTCTGGCCA TCGAGAACTT CATTTCGGTG CAGGAAACCG AAGGGCCGAA GCTGGCCACG GCGCTGGAAG AGCACGTCAA ACAGTACGAC GTCGACATCA TGAACCTGCA GCGCGGTGAC GCGCTGATTC CGGCCGCCGA GGGCGGTCTG CACGAAGTGC GCCTGGCGGG GGGCGCTTCG CTGAAGGCCA AGACCGTGAT CCTGGCCACT GGCGCCCGCT GGCGCGAAAT GAACGTGCCG GGTGAGCAAG AGTACCGTGG CCGCGGCGTG GCCTACTGCC CGCACTGTGA CGGCCCGCTG TTCAAGGGCA AACGCGTGGC GGTGATTGGC GGCGGCAACT CGGGTGTGGA AGCGGCCATC GACCTGGCCG GTATCGTCGC CCAGGTGACG CTGATCGAGT TCGACAGCCA GTTGCGTGCC GATGCGGTGT TGCAACGCAA GCTGCGCAGC CTGCCGAACG TCAACGTGAT CACCAGCGCG CTGACCACCG AGGTGCTGGG CAATGGCGAG AAGGTCACCG GGCTGCGCTA CAAGGACCGC ACCACGGATG AACAGCACGA AGTGGCACTG GAAGGCATCT TCGTGCAGAT TGGCCTGCTG CCCAACACTG ACTGGCTGAA GGGCACCGTC GAGCTGTCGC CGCGTGGCGA AATCATTGTC GACGCCAAGG GCCAGACCAG TATCCCGGGT GTGTTTGCAG CAGGTGACGT GACTACCGTG CCATACAAGC AGATCGTCAT TGCGGTGGGT GAGGGGGCCA AGGCGTCGCT CGCGGCCTTT GACCACCTGA TTCGGACTTC GGCACCGGCG TAA
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Protein sequence | MLDATLKSQL KTYLERVTQP IEIVASLDDG AKSRELHDLL VEIASLSNLI TFSADGTDAR RPSFSLNRPG ADISLRFAGI PMGHEFTSLV LALLQVGGHP SKASVEVIEQ IQALEGEFNF ETYFSLSCQN CPDVVQALNL MAVLNPNVRH VAIDGALFQD EVESRKIMAV PSIYLNGEVF GQGRMGLEEI IGKIDTNAGA RQAEKINAKE AFDVLVVGGG PAGAAAAIYA ARKGIRTGVA AERFGGQVLD TLAIENFISV QETEGPKLAT ALEEHVKQYD VDIMNLQRGD ALIPAAEGGL HEVRLAGGAS LKAKTVILAT GARWREMNVP GEQEYRGRGV AYCPHCDGPL FKGKRVAVIG GGNSGVEAAI DLAGIVAQVT LIEFDSQLRA DAVLQRKLRS LPNVNVITSA LTTEVLGNGE KVTGLRYKDR TTDEQHEVAL EGIFVQIGLL PNTDWLKGTV ELSPRGEIIV DAKGQTSIPG VFAAGDVTTV PYKQIVIAVG EGAKASLAAF DHLIRTSAPA
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