Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3246 |
Symbol | |
ID | 5191758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3656610 |
End bp | 3657344 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640587693 |
Product | hypothetical protein |
Protein accession | YP_001268556 |
Protein GI | 148548454 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.310754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.875608 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGTG GCCAGAGCCG GGCGCTGCCT GCCTGGCGTT GGAACAAGCG AGTGTCCATG GAGCAACATT CCTTCAAGGC TGCCCCCCGG CGGCTACTGG CGGCCTGCCT GCTGGCTGCC ACCCTGGCCG GCTGCGCCAG CGCACCGCAC GGCAACCTCA AGGGCCTGCC GCAGCGAGTC GAGATCAGCA GCGTGCCGTT CTACCGTGGC AACGCCAACC ACAGCGGGGC CATGGCGCTG GCGGCAGTGC TGTCGCAGCA GGGGGCGCCA ATCACGCCAG GGCTGCTGGA CAAGCCGCTG AACCTGCCCC AGGGCGTTGA AGCGCTGGGC ACCGGCATCC CCCGTGTTGC GCGGGAGTAC GGCATGGTCG TGTACCCGTT GGACCAACAG CTGGACGCGC TGCTGACCCA AGTGGCGGCG GGCAACCCGG TGCTGCTGCG TTACGAGGAC GGTTCGGCCT GGTGGGGCGA GCCCCGTTAT GCCGTTTTGA TCGGTTATGA CCGCTACAAG CAGCGGGTGC TGCTGCGCGC AGGCATGCAC CGGCGGCAGG TGATGGCGTT CGACGAGTTT GCCTCGGCGT GGGCGAAGCA AGGGAGTTGG GCGGTTTTGG TGCAGCCACC ACGGCAGCTA CCGGCCCAAG TGGATCGTCA GCGCTGGTTG CAGGCCGCGG ATGAGCTGGC GCGGGCGGGG CAGGAGGTTG CAGCGAAGCA GGCTGTGAAT AGCCTGAACA AGTAG
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Protein sequence | MIGGQSRALP AWRWNKRVSM EQHSFKAAPR RLLAACLLAA TLAGCASAPH GNLKGLPQRV EISSVPFYRG NANHSGAMAL AAVLSQQGAP ITPGLLDKPL NLPQGVEALG TGIPRVAREY GMVVYPLDQQ LDALLTQVAA GNPVLLRYED GSAWWGEPRY AVLIGYDRYK QRVLLRAGMH RRQVMAFDEF ASAWAKQGSW AVLVQPPRQL PAQVDRQRWL QAADELARAG QEVAAKQAVN SLNK
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