Gene Pput_3246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3246 
Symbol 
ID5191758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3656610 
End bp3657344 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content68% 
IMG OID640587693 
Producthypothetical protein 
Protein accessionYP_001268556 
Protein GI148548454 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.310754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.875608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGGTG GCCAGAGCCG GGCGCTGCCT GCCTGGCGTT GGAACAAGCG AGTGTCCATG 
GAGCAACATT CCTTCAAGGC TGCCCCCCGG CGGCTACTGG CGGCCTGCCT GCTGGCTGCC
ACCCTGGCCG GCTGCGCCAG CGCACCGCAC GGCAACCTCA AGGGCCTGCC GCAGCGAGTC
GAGATCAGCA GCGTGCCGTT CTACCGTGGC AACGCCAACC ACAGCGGGGC CATGGCGCTG
GCGGCAGTGC TGTCGCAGCA GGGGGCGCCA ATCACGCCAG GGCTGCTGGA CAAGCCGCTG
AACCTGCCCC AGGGCGTTGA AGCGCTGGGC ACCGGCATCC CCCGTGTTGC GCGGGAGTAC
GGCATGGTCG TGTACCCGTT GGACCAACAG CTGGACGCGC TGCTGACCCA AGTGGCGGCG
GGCAACCCGG TGCTGCTGCG TTACGAGGAC GGTTCGGCCT GGTGGGGCGA GCCCCGTTAT
GCCGTTTTGA TCGGTTATGA CCGCTACAAG CAGCGGGTGC TGCTGCGCGC AGGCATGCAC
CGGCGGCAGG TGATGGCGTT CGACGAGTTT GCCTCGGCGT GGGCGAAGCA AGGGAGTTGG
GCGGTTTTGG TGCAGCCACC ACGGCAGCTA CCGGCCCAAG TGGATCGTCA GCGCTGGTTG
CAGGCCGCGG ATGAGCTGGC GCGGGCGGGG CAGGAGGTTG CAGCGAAGCA GGCTGTGAAT
AGCCTGAACA AGTAG
 
Protein sequence
MIGGQSRALP AWRWNKRVSM EQHSFKAAPR RLLAACLLAA TLAGCASAPH GNLKGLPQRV 
EISSVPFYRG NANHSGAMAL AAVLSQQGAP ITPGLLDKPL NLPQGVEALG TGIPRVAREY
GMVVYPLDQQ LDALLTQVAA GNPVLLRYED GSAWWGEPRY AVLIGYDRYK QRVLLRAGMH
RRQVMAFDEF ASAWAKQGSW AVLVQPPRQL PAQVDRQRWL QAADELARAG QEVAAKQAVN
SLNK