Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3232 |
Symbol | |
ID | 5194325 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3641756 |
End bp | 3642664 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640587677 |
Product | ribokinase |
Protein accession | YP_001268542 |
Protein GI | 148548440 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.493529 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.585828 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCCA AGGTTGTGGT GGTCGGCAGC CTCAACATGG ACCTGGTGGT CCGCGCCCAG CGCCTGCCCC GGGCCGGCGA AACACTCCCC GGCGATAGCT TTTTCACGGT GCCGGGCGGC AAGGGTGCCA ACCAGGCGGT GGCGGTAGCG CGGCTGGGGG GCAGCGTGGC GATGATCGGC AATGTGGGGG ATGATGACTA CGGGCGGCAA CTGCACCGGG CCTTGTATGT CGAGGGTATC GACTGTCAGG GTGTCAGCAC CTGCCCGGGC ACGTCCAGCG GTGTGGCGCT GATCACGGTG GATGCTGCCA GCCAGAACTG TATTGTCATC ATTCCCGGCG CCAACGGCCT GCTGACGCCG CAGTCGGTGC TGCGTTTCGA TGCACTGCTG CAGGCCGCCG AGGTGGTCAT CTGCCAGCTG GAAGTGCCCA CTGGCACTGT GGCTTGCACA CTGGCCAGGG CGCGTGAGCT GGGCAAGCAG GTCATCCTGA ACCCAGCACC CGCTACCGGC CCCTTGCCAG CGGACTGGTT TGCGCATATC GATTACCTTA CCCCTAACGA AAGCGAGGCC GAAGCCTTGA CCGGTGTGGC GGTGACCGAC CAGGACAGTG CCCGGCGCGC AGGCGAGCGC TTGCTGCAGC TGGGGGCAGG CAAAGTGATT ATCACCTTGG GTGCGCAAGG TGCCTTGCTG GTTACTGCCC AAGGCCATCA GCACTATCCG GCGCCGCGCG TGCAACCGCT GGACACCACC GCTGCCGGCG ATACCTTCAT TGGTGGCTTT GCTGCCGGCC TGGTGCGTGG GCTGGACGAG GGGGAGGCGA TCGCCTTTGG CCAGCGTGCC GCGGCATTGT CGGTTACCCG TGCCGGTGCC CAACCGTCGA TTCCCTACCT GGCGGAGCTG ACGCCATGA
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Protein sequence | MNAKVVVVGS LNMDLVVRAQ RLPRAGETLP GDSFFTVPGG KGANQAVAVA RLGGSVAMIG NVGDDDYGRQ LHRALYVEGI DCQGVSTCPG TSSGVALITV DAASQNCIVI IPGANGLLTP QSVLRFDALL QAAEVVICQL EVPTGTVACT LARARELGKQ VILNPAPATG PLPADWFAHI DYLTPNESEA EALTGVAVTD QDSARRAGER LLQLGAGKVI ITLGAQGALL VTAQGHQHYP APRVQPLDTT AAGDTFIGGF AAGLVRGLDE GEAIAFGQRA AALSVTRAGA QPSIPYLAEL TP
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