Gene Pput_3232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3232 
Symbol 
ID5194325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3641756 
End bp3642664 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content66% 
IMG OID640587677 
Productribokinase 
Protein accessionYP_001268542 
Protein GI148548440 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID[TIGR02152] ribokinase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.493529 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.585828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCCA AGGTTGTGGT GGTCGGCAGC CTCAACATGG ACCTGGTGGT CCGCGCCCAG 
CGCCTGCCCC GGGCCGGCGA AACACTCCCC GGCGATAGCT TTTTCACGGT GCCGGGCGGC
AAGGGTGCCA ACCAGGCGGT GGCGGTAGCG CGGCTGGGGG GCAGCGTGGC GATGATCGGC
AATGTGGGGG ATGATGACTA CGGGCGGCAA CTGCACCGGG CCTTGTATGT CGAGGGTATC
GACTGTCAGG GTGTCAGCAC CTGCCCGGGC ACGTCCAGCG GTGTGGCGCT GATCACGGTG
GATGCTGCCA GCCAGAACTG TATTGTCATC ATTCCCGGCG CCAACGGCCT GCTGACGCCG
CAGTCGGTGC TGCGTTTCGA TGCACTGCTG CAGGCCGCCG AGGTGGTCAT CTGCCAGCTG
GAAGTGCCCA CTGGCACTGT GGCTTGCACA CTGGCCAGGG CGCGTGAGCT GGGCAAGCAG
GTCATCCTGA ACCCAGCACC CGCTACCGGC CCCTTGCCAG CGGACTGGTT TGCGCATATC
GATTACCTTA CCCCTAACGA AAGCGAGGCC GAAGCCTTGA CCGGTGTGGC GGTGACCGAC
CAGGACAGTG CCCGGCGCGC AGGCGAGCGC TTGCTGCAGC TGGGGGCAGG CAAAGTGATT
ATCACCTTGG GTGCGCAAGG TGCCTTGCTG GTTACTGCCC AAGGCCATCA GCACTATCCG
GCGCCGCGCG TGCAACCGCT GGACACCACC GCTGCCGGCG ATACCTTCAT TGGTGGCTTT
GCTGCCGGCC TGGTGCGTGG GCTGGACGAG GGGGAGGCGA TCGCCTTTGG CCAGCGTGCC
GCGGCATTGT CGGTTACCCG TGCCGGTGCC CAACCGTCGA TTCCCTACCT GGCGGAGCTG
ACGCCATGA
 
Protein sequence
MNAKVVVVGS LNMDLVVRAQ RLPRAGETLP GDSFFTVPGG KGANQAVAVA RLGGSVAMIG 
NVGDDDYGRQ LHRALYVEGI DCQGVSTCPG TSSGVALITV DAASQNCIVI IPGANGLLTP
QSVLRFDALL QAAEVVICQL EVPTGTVACT LARARELGKQ VILNPAPATG PLPADWFAHI
DYLTPNESEA EALTGVAVTD QDSARRAGER LLQLGAGKVI ITLGAQGALL VTAQGHQHYP
APRVQPLDTT AAGDTFIGGF AAGLVRGLDE GEAIAFGQRA AALSVTRAGA QPSIPYLAEL
TP