Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3230 |
Symbol | |
ID | 5191101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3640295 |
End bp | 3641296 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640587675 |
Product | inosine/uridine-preferring nucleoside hydrolase |
Protein accession | YP_001268540 |
Protein GI | 148548438 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.618451 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAGT CCCTGCTACA AGGAGTTGTT TTCATGGCCA CAGCCTCCAC CCTCCAGGCC GCACCCATCG ACCTGATCAT CGACACCGAT CCCGGCGCGG ACGACGTGGT CGCGCTGTTT CTGGCCATGG CTTCGCCCAA CGAACTCAAT ATCCGCGCCA TCACCACCGT GGCCGGCAAC GTGCGCCTAA ACAAGACCTC GCGCAATGCC CGCCTGGCCC GCGAATGGGC GGGGCGCGAA GACATCCCGG TGTATGCCGG TGCCGGCCGC CCATTGGTGC GCACGCCGAT CTACGCCGCC GACGTTCATG GCGAAGAAGG CCTCACCGGT GTACCGGTGC ACGAGCCGAA AGCGCCCCTG GCCCAGGGCA ATGCCGTGCA ATACCTGGTC GATACCCTCA GCGCAGCCAA ACCGCACAGC ATCACCGTCG CCATGCTCGG CCCGCAGACC AACCTGGCCC TGGCGCTGAT CCAGCGCCCG GGCATCGTCA ACGGCATCAA AGAGGTGGTG GTCATGGGGG GAGCCCATTT CAACGGCGGC AACATCACCC CGGTGGCGGA GTTCAACCTC TACGCCGACC CGCACGCCGC CGAAGTGGTG CTGGCCAGCG GCGTGCAGCT GACCTACCTG CCGCTGGATG TCACGCACAA GCTGCTGACC AGTAACGCTC GCCTGAAGCA ACTGGCAGCC GTGAACAACC AGGCCAGCAA GCGCGTGGTG GATATCCTCA ATGCTTACAT CACCCACGAT ATGGACGTGT ATGGCATACC TGGCGGCCCT GTGCACGACG CCAGCGTCAT CGCCTACCTG TTAAAGCCCG AGCTGTTCAG TGGCCGGCGT ATCCACATGA GCATCGACAG CCGCGAAGGG CCCACTTTCG GCCAGACAAT TGCAGACTGG TACGGTGTGC TCAAGCGGCC GGCGAATGTG CTGTGGGTGG AGCAGGGTGA TGCCCAGGGG CTGTTCGACC TGCTCAGTGC CCGTCTGGCG CGATTGGAAT AG
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Protein sequence | MLKSLLQGVV FMATASTLQA APIDLIIDTD PGADDVVALF LAMASPNELN IRAITTVAGN VRLNKTSRNA RLAREWAGRE DIPVYAGAGR PLVRTPIYAA DVHGEEGLTG VPVHEPKAPL AQGNAVQYLV DTLSAAKPHS ITVAMLGPQT NLALALIQRP GIVNGIKEVV VMGGAHFNGG NITPVAEFNL YADPHAAEVV LASGVQLTYL PLDVTHKLLT SNARLKQLAA VNNQASKRVV DILNAYITHD MDVYGIPGGP VHDASVIAYL LKPELFSGRR IHMSIDSREG PTFGQTIADW YGVLKRPANV LWVEQGDAQG LFDLLSARLA RLE
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