Gene Pput_3207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3207 
Symbol 
ID5192879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3622496 
End bp3623056 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content54% 
IMG OID640587651 
ProductGTP cyclohydrolase I 
Protein accessionYP_001268517 
Protein GI148548415 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.574177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0542023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACATT CGTTAGCCGA GCACTATCAT GAAATCCTGG TCGGTATTGG TGAAAACCCG 
CAGCGCGAAG GGCTTCTGGA CACACCCCAG CGTGCGGCAA AAGCGATGCA GTACTTGTGC
AACGGGTATG CCCAGGATCT TCACGAGGTC GTGAACGGTG CTCTGTTCGA GAGTGAAAAC
GATGAAATGA TTGTGGTGCG TGACATTGAG CTCTACTCAT TGTGCGAACA CCACATGCTG
CCGTTTATCG GCAAGGCGCA TGTCGCGTAC CTGCCAACAG GGCGCGTGTT AGGGCTTTCC
AAGGTTGCAC GCGTAGTGGA CATGTTCGCC CGTCGTTTAC AGATACAGGA AAATCTCACG
CGGCAAATTG CGTATGCCGT GCAGGAAGTC ACGGATGCCG CCGGGGTAGC GGTCGTGATC
GAAGCCAAGC ATATGTGCAT GATGATGCGC GGTGTAGAGA AGCAGAACTC GGTGATGATT
TCATCCGTGA TGTTAGGTGC ATTTCGCGAT GCCCCTTCGA CTCGGCACGA GTTCCTGAAC
CTCATTGGAC GACACAATTG A
 
Protein sequence
MSHSLAEHYH EILVGIGENP QREGLLDTPQ RAAKAMQYLC NGYAQDLHEV VNGALFESEN 
DEMIVVRDIE LYSLCEHHML PFIGKAHVAY LPTGRVLGLS KVARVVDMFA RRLQIQENLT
RQIAYAVQEV TDAAGVAVVI EAKHMCMMMR GVEKQNSVMI SSVMLGAFRD APSTRHEFLN
LIGRHN