| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3201 |
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| Symbol | |
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| ID | 5194073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3616792 |
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| End bp | 3618039 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640587645 |
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| Product | outer membrane porin |
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| Protein accession | YP_001268511 |
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| Protein GI | 148548409 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.27407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0173746 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATGCC GCACCCTGTA CCCGCTCGTC CCCACATTCA CACTGGCAGC CAGCCTGCCA
CTGCAAGCCC TGGCCGAAGG CTTCGTCGAC GATGCCAAGG CAAGCCTGAC GTTGCGTAAC
TTCTACATGA ACCGCGACTA CACGGGCACG GCAAGCCAAG GCAAAGCCGA GGAATGGACG
CAAAGTTTCA TCCTCGACTT CAAGTCCGGC TTCACCCCCG GCGTGGTCGG TTTCGGCGTT
GACGTGCTGG GCCTTTACAG CATCAAACTT GATGGCGGCA AGGGCACCGC CGGCACGCAG
TTGCTGCCTG TTCATGACGA CGGGCGCCCG GCGGACGACT TTGGCCGCAC GGCGCTGGCG
GGCAAGATGC GGGTGTCCAA GACGGAACTC AAAGTCGGTG AGTGGTCGCC TACCCTGCCC
ATCCTGCGCG CCGATGACGG CCGCTCGCTG CCACAAACCT TGCAGGGCGC GCAGGTCACC
TCCAACGAGC TGGCCGGCCT GACCCTGTAT GGCGGCCAGT TCCGCCAGAA CAGCCCGCGC
AACGACGCCA GCATGCAGGA CATGAGCCTG TTCACGCGCA CAGCCTTCAC CTCGGACCGT
TTCAACTTCG CCGGCGGTGA ATACCGCTTC AACCAGGAGC GCACCCTGGT CGGCGCCTGG
TATGCCCAGC TGGAAGACAT CTACCAGCAG CGCTACTTCC AGGTGCAGCA TCAACAGCCG
CTGGGCAACT GGGTACTGGG CGCCAACCTG GGCTACTTCT GGGGCAAGGA CGACGGTGGC
GCCAAAGCCG GCGAACTGGA CAACCGCACC GCTTCGGGCC TGTTCTCGGC GAAGCTGGGT
GGCAACACGT TCTACGTCGG CTTGCAGAAG GTCATGGGCG ATGATGAATG GTTCCGGGTC
AATGGCACCA GCGGCGGCAC GCTGGCCAAC GACGCCTTCG GCTCCAGCTA TGAAAGCGCC
CGCGAGCGCT CCTGGCAGGT GCGCCACGAC TTCAACTTCG TGGTGCTTGG CATACCCGGC
CTGACCCTGA TGAACCGCTA TATCCACGGT GACAACGTGC ACAACGCCAG CACCCAGGAC
GGCACCGAGT GGGGCCGCGA AAGCGAGCTG GCCTATGTGA TCCAGTCTGG GCCGTTCAAG
GCCCTGAACC TCAAGTGGCG CAACTCCAGC CAGCGCCGGG ACTGGGGCAG CACCAACAGT
TTCGATGAGA ACAGGCTGAT CGTCAGCTAC CCGCTGAGCC TGCTTTAA
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| Protein sequence | MKCRTLYPLV PTFTLAASLP LQALAEGFVD DAKASLTLRN FYMNRDYTGT ASQGKAEEWT
QSFILDFKSG FTPGVVGFGV DVLGLYSIKL DGGKGTAGTQ LLPVHDDGRP ADDFGRTALA
GKMRVSKTEL KVGEWSPTLP ILRADDGRSL PQTLQGAQVT SNELAGLTLY GGQFRQNSPR
NDASMQDMSL FTRTAFTSDR FNFAGGEYRF NQERTLVGAW YAQLEDIYQQ RYFQVQHQQP
LGNWVLGANL GYFWGKDDGG AKAGELDNRT ASGLFSAKLG GNTFYVGLQK VMGDDEWFRV
NGTSGGTLAN DAFGSSYESA RERSWQVRHD FNFVVLGIPG LTLMNRYIHG DNVHNASTQD
GTEWGRESEL AYVIQSGPFK ALNLKWRNSS QRRDWGSTNS FDENRLIVSY PLSLL
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