Gene Pput_3197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3197 
Symbol 
ID5192915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3612727 
End bp3613635 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content59% 
IMG OID640587641 
Productglutaminase 
Protein accessionYP_001268507 
Protein GI148548405 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2066] Glutaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0628801 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.211141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACGC TGTTGAACGA GATTCTCGAA GAAGTACGTC CCTTGATCGG CAAGGGCAAA 
GTCGCTGACT ACATTCCTGC GCTGGCGGAC GTGCCGGCGA ACCAGCTGGG CATCGCTGTC
TATGGCAACG ATGGCAGTTA TCACTGCGCA GGCGACGCGC GGGTGCCATT CTCGGTGCAG
AGCATTTCCA AGGTGTTCAG CCTGGTTCAG GCCATTGGCC ATTCGGGGGA AGCCATTTGG
GAGCGGTTGG GGCATGAGCC TTCGGGGCAG CCATTCAACT CGTTGGTGCA GCTGGAGTTC
GAGCGCGGGC GGCCGCGTAA CCCGTTCATC AATGCAGGGG CATTGGTGAT CTGCGATATC
AATCAGTCGC GCTTCGCTGC CCCCACGTTG TCGATGCGCG ATTTTGTCCG ACGGCTTTCA
GGCAACCCCC ACATCTCGAT CAATACCCGG GTCGCTGATT CGGAATATCA GTTTCGCGCG
CGCAACGCTG CCATGGCGTA CCTGATGCAG TCATTTGGCA ACTTCCATAA CGAGGTCGAG
ACGGTGCTGC GCAGTTACTT CAGTTACTGC GCACTGCAAA TGAACTGCCT GGACCTGGCG
CGGGCATTCT GCTTCCTGGC CAATGATGGG TTCTGCAAGC ACAGCGGTGA GCAGATCCTG
ACGCGGCGCC AGACCCAACA AGTGAACTCG ATCATGGCCA CCAGCGGGCT GTATGACGAG
GCGGGGAATT TCGCCTTCAG GGTGGGTTTG CCTGGCAAGA GTGGTGTGGG TGGCGGGATC
GTGGCGATCG TGCCGGGTCA ATTTACCGTA TGCGTGTGGT CGCCAGAGTT GAATGCGGCG
GGCAACTCCC TGGCCGGGAT GGCGGCGCTT GAGCTGCTCA GTTCGCGGAT CGGATGGTCG
GTGTTCTGA
 
Protein sequence
MQTLLNEILE EVRPLIGKGK VADYIPALAD VPANQLGIAV YGNDGSYHCA GDARVPFSVQ 
SISKVFSLVQ AIGHSGEAIW ERLGHEPSGQ PFNSLVQLEF ERGRPRNPFI NAGALVICDI
NQSRFAAPTL SMRDFVRRLS GNPHISINTR VADSEYQFRA RNAAMAYLMQ SFGNFHNEVE
TVLRSYFSYC ALQMNCLDLA RAFCFLANDG FCKHSGEQIL TRRQTQQVNS IMATSGLYDE
AGNFAFRVGL PGKSGVGGGI VAIVPGQFTV CVWSPELNAA GNSLAGMAAL ELLSSRIGWS
VF