Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3167 |
Symbol | |
ID | 5192279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3583293 |
End bp | 3584609 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640587613 |
Product | major facilitator transporter |
Protein accession | YP_001268479 |
Protein GI | 148548377 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCAAT CCCTAGCCGC GTTCAAACGC TGGCGCATCC AGATTTTCGC CATCACCTGG CTGGCTTACG CCGCCTTCTA CTTCACCCGC AAAGCCTTCT CGGTGGCCAA GCTGGGCATC GCCGAAGACC CAGGTTTCAT GCTCGACAAG GCCGCCATGG CCAACCTGGA CGCCATCTAC CTGGCCGCCT ATGCCGTGGG CCAATTCACC TGGGGCATGC TTGCCGACCG CTTCGGCCCG CGCGTAGTCG TGCTGGGCGG GTTGCTGATT TCTGCGGCGG CGGCAGTGGT GATGGGCAGT TACGCAACCT TCCCGATCTT CGCCACCTGC ATGCTGGTAC AGGGCCTGGC GCAATCCACC GGCTGGGCCG GCTTGTGCAA GAACATCGGC AGCTTCTTCC CGGCTTCGCA GCGCGGGCGG GTGCTGGGCC TGTGGAGTTC CTGCTATGCC TTCGGCGGCC TGGTGGCCTC GCCGTTCGCG GGCTGGTGGG CCTACACCCT GGTGGGTACC TGGCATGCGG CGTTCTTCTC CAGCGCGGCA GTGGTGGCGC TGGTGGCGGT GCTGTTCTTC TTCCTGCAGC GCAACAAACC CGAGGACGTC GGCTTGCCGG CGGTTGAGCC CGAGCCGCAA AGCATGGCCC CGGCCGACAA CCTGTGCAGC GTGTGGGCAC CCCTGCGGGA AATCTTGCGC AACCGCACGG TGTTGACCCT GGGCCTGGCG TATTTCCTGC TGAAGCCGGC GCGCTACGCC ATCTTGCTGT GGGGCCCTGT GATCGTCTTC GAGCAGATGC CCTCGGTGGG CAAAGTGGGC GCGGCAATCA TCCCGACTGC TTTCGAACTG GCCGGGCTGC TTGGCCCGAT CATGATCGGC CTGGCCTCCG ACAAACTGTT TGGCGCCCGG CGCATGCCGG CCTGCGTGAT CAGCCTGGTG CTGCTGACCG TGACACTGGC GGCGTTCATG GCGGCCATGC ACACCGGCAG CGTGCTGCTG GTGGTGGCCC TGCTGTTCGT CATGGGCCTG ACCCTGTACG GGCCGGACTC GATGATCAGC GGCGCTGCAG CCATCGACTT CGGCACCGCC AAGGCCGGCG CCACCGCAGC AGGTTTCGTC AACGGCTGTG GCTCGGTGGG CGCGGTGCTG GGTGGGCTGC TGCCGGGTTA CTTCGACGGC GTCACGGTGT TCATCGTGTT CGCGGGCTGT GCGCTGTTCT CGGCGCTGGT GTTGCTGCCG CACTGGAACA GCCGCCCGGC CAGCAGCGCG CAAGGCACCG ACGTGGCACC GAACACCAGC ATGGCAATCA AGCCACTGCG TACTTAA
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Protein sequence | MNQSLAAFKR WRIQIFAITW LAYAAFYFTR KAFSVAKLGI AEDPGFMLDK AAMANLDAIY LAAYAVGQFT WGMLADRFGP RVVVLGGLLI SAAAAVVMGS YATFPIFATC MLVQGLAQST GWAGLCKNIG SFFPASQRGR VLGLWSSCYA FGGLVASPFA GWWAYTLVGT WHAAFFSSAA VVALVAVLFF FLQRNKPEDV GLPAVEPEPQ SMAPADNLCS VWAPLREILR NRTVLTLGLA YFLLKPARYA ILLWGPVIVF EQMPSVGKVG AAIIPTAFEL AGLLGPIMIG LASDKLFGAR RMPACVISLV LLTVTLAAFM AAMHTGSVLL VVALLFVMGL TLYGPDSMIS GAAAIDFGTA KAGATAAGFV NGCGSVGAVL GGLLPGYFDG VTVFIVFAGC ALFSALVLLP HWNSRPASSA QGTDVAPNTS MAIKPLRT
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