| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3163 |
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| Symbol | |
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| ID | 5193344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3578433 |
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| End bp | 3579869 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587609 |
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| Product | aromatic-L-amino-acid decarboxylase |
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| Protein accession | YP_001268475 |
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| Protein GI | 148548373 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.491116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAACC CCAGGAGAGC TAGCGTGACC CCCGAACAAT TCCGCCAGTA TGGCCACCAA
CTGATCGACC TGATTGCCGA CTACCGTCAG ACCGTGGGCG AACGCCCGGT CATGGCCCAG
GTCGAACCTG GCTATCTCAA GGCCGCCTTG CCCGCAACTG CCCCTCAACA AGGCGAACCT
TTCGCGGCCA TTCTCGACGA CGTCAATAAC CTGGTCATGC CCGGCCTTTC CCATTGGCAG
CACCCGGATT TCTATGGCTA TTTCCCTTCC AATGGCACCC TGTCCTCGGT GCTGGGGGAC
TTCCTCAGTA CCGGTCTGGG CGTGCTGGGC CTGTCCTGGC AATCCAGCCC GGCCCTGAGC
GAACTGGAAG AAACCACCCT CGACTGGCTA CGCCAGTTGC TTGGCCTGTC TGGCCAGTGG
AGTGGCGTGA TCCAGGACAC CGCCTCGACC AGCACCCTGG TGGCGCTGAT CAGTGCCCGT
GAACGCGCCA CTGACTACGC CTTGGTACGT GGTGGCCTGC AGGCCGAGCC CAAGCCTTTG
ATCGTGTATG TCAGCGCCCA CGCCCACAGC TCGGTGGACA AGGCTGCACT GCTGGCAGGT
TTTGGCCGCG ACAATATCCG CCTGATCCCC ACCGACGACC GCTACGCCCT TCGCCCAGAA
GCACTGCAGG CGGCGATCGA ACAGGACCTG GCTGCCGGCA ACCAGCCCTG CGCCGTGGTT
GCCACCACCG GCACCACGAC GACCACTGCC CTCGACCCGC TGCGCGCGGT GGGCGAAATC
GCCCAGGCCA ATGGGCTGTG GTTGCACGTT GATTCGGCCA TGGCCGGCTC GGCGATGATC
CTGCCCGAGT GCCGCTGGAT GTGGGACGGC ATCGAGCTGG CCGATTCGGT GGTGGTCAAC
GCGCACAAAT GGCTGGGTGT GGCCTTCGAT TGCTCGATCT ACTACGTGCG CGATCCGCAG
CACCTGATTC GCGTGATGAG CACCAATCCC AGCTACCTGC AGTCGGCGGT GGATGGCGAG
GTGAAGAACC TGCGCGACTG GGGCATTCCG CTGGGCCGTC GGTTCCGTGC GTTGAAGCTG
TGGTTCATGT TGCGCAGCGA GGGTGTCGAT GCATTGCAGG CGCGGCTGCG GCGTGACCTG
GATAATGCCC AGTGGCTGGC GGGGCAGGTC GAGGCGGCGG CGGAGTGGGA AGTGCTGGCG
CCAGTGCAGC TGCAGACCTT GTGCATTCGC CATCGACCGG CGGGGCTTGA AGGGGAGGCG
CTGGATGCGC ATACCAAGGG TTGGGCCGAG CGGCTGAATG CATCCGGCGA TGCTTATGTG
ACGCCGGCTA CACTGGACGG GCGGTGGATG GTGCGGGTTT CGATTGGTGC GCTGCCGACC
GAGCGGGGGG ATGTGCAGCG GCTGTGGGCA CGTCTGCAGG ACGTGATCAA GGGCTGA
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| Protein sequence | MDNPRRASVT PEQFRQYGHQ LIDLIADYRQ TVGERPVMAQ VEPGYLKAAL PATAPQQGEP
FAAILDDVNN LVMPGLSHWQ HPDFYGYFPS NGTLSSVLGD FLSTGLGVLG LSWQSSPALS
ELEETTLDWL RQLLGLSGQW SGVIQDTAST STLVALISAR ERATDYALVR GGLQAEPKPL
IVYVSAHAHS SVDKAALLAG FGRDNIRLIP TDDRYALRPE ALQAAIEQDL AAGNQPCAVV
ATTGTTTTTA LDPLRAVGEI AQANGLWLHV DSAMAGSAMI LPECRWMWDG IELADSVVVN
AHKWLGVAFD CSIYYVRDPQ HLIRVMSTNP SYLQSAVDGE VKNLRDWGIP LGRRFRALKL
WFMLRSEGVD ALQARLRRDL DNAQWLAGQV EAAAEWEVLA PVQLQTLCIR HRPAGLEGEA
LDAHTKGWAE RLNASGDAYV TPATLDGRWM VRVSIGALPT ERGDVQRLWA RLQDVIKG
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