Gene Pput_3153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3153 
Symbol 
ID5190796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3555120 
End bp3555605 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content62% 
IMG OID640587599 
Producthypothetical protein 
Protein accessionYP_001268465 
Protein GI148548363 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.678742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.723292 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCAGG TTTTGCTCAT CGTCGATGTT CAGTCCACCT TCAGCCCACC CGAGTGGCTG 
GTCGATGGTT TGCGGCGGTT GTCAGCGAAC ATTCCCACCA TAGCCTCGGT CGAGTTGCAC
GATGAACAGG TCACGCCGTT CGAGCGCCAG CTCGGTTGGC ACCCGGCGGC CGAGGACGAA
AGCCTGGTCG AGGCCGACCA GGTGTTCGTC AAGCATGGCT ATGGGCAAAG TGCCGAAGCT
ATCGACTACA TCCGGCAATT GGGTGTAGAG CGGGTGCTGG TGTGTGGGTT GCAGACCGAA
ACCTGCGTGC TGGCCGCCGG CTTTGCCCTG TTCGATGCAG GGCTGATGCC CACGCTGGTG
ACAGACATGA CAATAGGGTC GTCGCTGGAC CGTTCGGGCA AGCTGGGTAC CGACCTGTGG
AAGCACCACT TCCGCCAGGT CACTACCTCG GCCGAGGTGC TGGCTGAACT GGCCGGACGC
GCGTAG
 
Protein sequence
MRQVLLIVDV QSTFSPPEWL VDGLRRLSAN IPTIASVELH DEQVTPFERQ LGWHPAAEDE 
SLVEADQVFV KHGYGQSAEA IDYIRQLGVE RVLVCGLQTE TCVLAAGFAL FDAGLMPTLV
TDMTIGSSLD RSGKLGTDLW KHHFRQVTTS AEVLAELAGR A