Gene Pput_3138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3138 
Symbol 
ID5192241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3533839 
End bp3534369 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content68% 
IMG OID640587584 
Producthypothetical protein 
Protein accessionYP_001268450 
Protein GI148548348 
COG category[S] Function unknown 
COG ID[COG3009] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGAC TGCGCAATGT ATGTGTGGCC AGCCTGCTGG TGTGGCTCGG GGGCTGCAGC 
AGTACGCCGA ACAACTACCA CACGTTGGTA CCGAGCGAAC CGGTACGTGA CAGCGGCCAG
CGCATCCAGG TGGTCAGGGT GGCTGTGCCG CCCCAGGTCG ACCGCCCACA GTTGGTGGTG
CGGCAAGGGC AGAGCGGCCT GGCCATCCTG GAGACGGAGT GGTGGGGCGC CAACCTGGTG
GATGAATTCC GCAGCGCCCT GCAGGACCTG TTGGGCGGCC CGGCGGGCGG TGGCAAGGCG
TCGCTGCGGG TGGATGTGCA GCGCTTCGAC ACGGTACCGG GGCGCTATGC CTCGCTGGAG
GCGGTGTGGC GCCTGAAGCA GCAAGGGCAG GCCGAGCTGA CCTGCCGTAC GTCTGTGCAG
ACTGCCGCGG ACAACAGCAT CACCAGCCTG GTGAATGCAC ACCAGGCCAA CCTGCGCAAG
TTGGCCGAGG CGGTGCGGGG GAGTGCCCTG CAGGGTAGCT GCCGGGCATG A
 
Protein sequence
MQRLRNVCVA SLLVWLGGCS STPNNYHTLV PSEPVRDSGQ RIQVVRVAVP PQVDRPQLVV 
RQGQSGLAIL ETEWWGANLV DEFRSALQDL LGGPAGGGKA SLRVDVQRFD TVPGRYASLE
AVWRLKQQGQ AELTCRTSVQ TAADNSITSL VNAHQANLRK LAEAVRGSAL QGSCRA