| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3130 |
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| Symbol | |
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| ID | 5192955 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3525018 |
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| End bp | 3526400 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640587576 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001268442 |
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| Protein GI | 148548340 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACAA CAACAAGTAC AGCCCATAGC CCCGCCCCGC ATGCACCCTC GCAACCCGGC
ACCAGCACCG GCCGCTTCCG CAAGTCCATG AGCATGACCG CCCTGGTGCT GTTTGGCCTG
GCCTACATGG TGCCCCTGGC CGTATTCACC ACCTACGGGC TGGTCACCCA GATGACCAAA
GGGCACCTGC CCACCGCCTA CCTGCTCACG CTCGCCGCCA TGCTGCTGAC CGCCTACAGT
TACGGCCGCA TGGTCCAGGC CCACCCCTAC TCCGGCTCGG TCTACACCTA CACGCGCAAG
GCCTTCGGCA GCCATATCGG CTTCATCACC GGTTGGACAC TGCTGCTCGA CTACATCTTT
CTGCCGCTGC TCAGCTACCT GCTGATCGGC ATCTACATGT CGGAATACTT CCCGACCATC
CATGCCTGGG TGTGGGTGGC GGGCTCCATT GCCCTGGTCA CCTTCCTCAA CCTGATCGGC
ATCGAGTCGA TCACCCGGGT CAACTGGATC CTGGTGGTGG TGCAATTGGT GTTCATCATC
GTCTTCGTCG CCCTGTCCAT TCTCAAGCTC AGCGGACAGG CGGAGCCGGT GTCGCTGCTG
GCCCCCTTGC ACCACGAAGG CTTCAGCGTG CCGTTGATCA TGACCGGCGC CGCCGTGCTG
TGCCTGTCGT TCCTCGGCTT CGATGCGGTG TCGACCATGG CTGAGGAAAC CAGTAACCCG
ACCTACCGCA TTCCCGTGGC GATTCTGGCG GTGTCGTTGA TCGGCGGCCT GCTGTTTCTG
GTGGTGTCTT ATTGCGCACA GATGGTGTTC CCCGATTGGG GCAGCTTCGC CGATCCGGAT
TCGGCGTCGG TCGACGTGAT GCGCCGGGTG GGCGGCGAGC TGCTGGTAAC CGCCTTCACC
GCGACCTACG TGGCCGGCTG CTTCGCTTCG GCCATGGTGT CCCAAGCCAG CGTGTCGCGC
GTACTGTTCG CCATGGGCCG TGACGGCGCA TTGCCGAGGG CATTCGGCCA GCTGGTGACG
AAAAAGCGCG TGCCGGCCAC TGCCATCCTG GTGGTCAGCC TGCTGTCGCT GATCGCCCTG
GTGATCACCC TGGATACCGT GGCGAACATG ATCAGCTTTG GCGCACTGTT CGCCTTTTCG
GCGGTGAACC TGGCGGTGGT CAAGCACTAC CTGGTGGACC AGAAACTGCG CGGTTGCCGC
AACTGCCTGC TGTACGGCGC CATTCCCGGC CTGGGCTTTC TCAGCACGCT GTGGCTATGG
AGCAGCCTGA CCAGCCTGTC GTTCACCATC GGCCTGTGCT GGATGGGCCT GGGCCTGTTG
GTGCTACTGG GGCTGACCCG GGCGTTGCGC GTGAAGCTGC CAGAGTTGCA GATGGCCGAG
TGA
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| Protein sequence | MHTTTSTAHS PAPHAPSQPG TSTGRFRKSM SMTALVLFGL AYMVPLAVFT TYGLVTQMTK
GHLPTAYLLT LAAMLLTAYS YGRMVQAHPY SGSVYTYTRK AFGSHIGFIT GWTLLLDYIF
LPLLSYLLIG IYMSEYFPTI HAWVWVAGSI ALVTFLNLIG IESITRVNWI LVVVQLVFII
VFVALSILKL SGQAEPVSLL APLHHEGFSV PLIMTGAAVL CLSFLGFDAV STMAEETSNP
TYRIPVAILA VSLIGGLLFL VVSYCAQMVF PDWGSFADPD SASVDVMRRV GGELLVTAFT
ATYVAGCFAS AMVSQASVSR VLFAMGRDGA LPRAFGQLVT KKRVPATAIL VVSLLSLIAL
VITLDTVANM ISFGALFAFS AVNLAVVKHY LVDQKLRGCR NCLLYGAIPG LGFLSTLWLW
SSLTSLSFTI GLCWMGLGLL VLLGLTRALR VKLPELQMAE
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