| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3084 |
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| Symbol | |
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| ID | 5191133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3469780 |
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| End bp | 3471567 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587530 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_001268396 |
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| Protein GI | 148548294 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGAT CCCCACGTCG CCCCTTGTTC GCCGTGAGCC TGGTGCTCAG CGCCATGCTG
CTTGCCGGCG CGGCTCACGC CGCTGTCAGC AATGAAGAAA TCCTCCAGGA CCCGAAGAAC
CCGCAGCAGA TCGTGACCAA TGGCCTGGGC GTCCAGGGCC AGCGCTACAG CCCGCTGGAT
CTGCTCAACG TCAATAACGT CAAGGAGCTG CGCCCGGTCT GGGCGTTCTC CTTCGGCGGG
GAGAAGCAGC GCGGCCAGCA GGCCCAGCCG CTGATCAAGG ACGGGGTGAT GTACCTGACC
GGCTCCTACT CGCGGGTGTT CGCCGTGGAC GCCCGCACCG GCAAGAAACT GTGGCAATAC
GATGCACGTC TGCCGGATGA CATCCGCCCC TGCTGCGACG TGATCAACCG CGGCGTCGCA
CTGTACGGCA ACCTGGTGTT CTTCGGCACG CTGGACGCCA AGCTGGTGGC CCTGAACAAG
GACACCGGCA AGGTGGTCTG GAGCAAGAAG GTTGCCGACC ACAAAGAAGG CTACTCCATC
AGTGCCGCGC CGATGATCGT CAATGGCAAG CTGATTACCG GCGTTGCCGG CGGCGAGTTC
GGCGTGGTGG GCAAGATCCA GGCGTACAAC CCGGAGAACG GCGAGCTGCT GTGGATGCGC
CCCACCGTGG AAGGGCACAT GGGCTATGTG TACAAGGACG GCAAGGCGAT CGAGAACGGT
ATTTCCGGCG GTGAGGCGGG CAAGACCTGG CCTGGCGACC TGTGGAAGAC CGGCGGCGCC
GCGCCGTGGC TGGGCGGTTA CTACGACCCG GAAACCAACC TGATCCTGTT TGGTACCGGT
AACCCGGCCC CGTGGAACTC GCACCTGCGC CCCGGTGACA ACCTGTACTC CTCCTCACGC
CTGGCACTGA ACCCGGACGA CGGCACCATC AAGTGGCACT TCCAGAGCAC GCCGCATGAC
GGCTGGGACT TCGACGGCGT GAACGAACTG ATCTCGTTCA ACTACAAGGA CGGCGGCAAG
GAGATCAAGG CTGCCGCCAC GGCCGACCGC AACGGTTTCT TCTACGTGCT CGATCGCACC
AACGGCAAGT TCATCCGCGG CTTCCCGTTC GTTGACAAGA TCACCTGGGC CACGGGCCTG
GACAAGGACG GCCGGCCGAT CTACAACGAC GCCAGCCGCC CGGGCGCACC CGGCAGCGAG
GCCAAGGGCA GCTCGGTGTT CGTCGCGCCG GCCTTCCTCG GCGCCAAGAA CTGGATGCCG
ATGGCCTACA ACAAGGACAC AGGGCTGTTC TACGTGCCGT CCAACGAGTG GGGCATGGAC
ATCTGGAACG AAGGCATCGC CTACAAGAAA GGTGCGGCGT TCCTCGGCGC CGGCTTCACC
ATCAAGCCGC TCAATGAAGA CTACATCGGC GTGCTGCGCG CCATCGACCC GATCAGCGGC
AAGGAAGTGT GGCGCCACAA GAACTACGCG CCGCTGTGGG GCGGTGTGCT GACCACCAAG
GGCAATCTGG TGTTCACGGG CACGCCAGAG GGCTTCCTGC AGGCATTCAA CGCCAAGACC
GGCGACAAGG TCTGGGAATT CCAGACCGGC TCAGGCGTGC TTGGCTCGCC CGTCACCTGG
GAAATGGACG GCGAGCAATA CGTCTCGGTG GTCTCCGGCT GGGGCGGCGC GGTGCCGCTG
TGGGGCGGCG AAGTGGCCAA ACGGGTCAAG GACTTCAACC AGGGCGGCAT GCTCTGGACC
TTCAAGTTGC CCAAGCAGTT GCAGCAAACG GCAAGCGCCA AGCCATAA
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| Protein sequence | MTRSPRRPLF AVSLVLSAML LAGAAHAAVS NEEILQDPKN PQQIVTNGLG VQGQRYSPLD
LLNVNNVKEL RPVWAFSFGG EKQRGQQAQP LIKDGVMYLT GSYSRVFAVD ARTGKKLWQY
DARLPDDIRP CCDVINRGVA LYGNLVFFGT LDAKLVALNK DTGKVVWSKK VADHKEGYSI
SAAPMIVNGK LITGVAGGEF GVVGKIQAYN PENGELLWMR PTVEGHMGYV YKDGKAIENG
ISGGEAGKTW PGDLWKTGGA APWLGGYYDP ETNLILFGTG NPAPWNSHLR PGDNLYSSSR
LALNPDDGTI KWHFQSTPHD GWDFDGVNEL ISFNYKDGGK EIKAAATADR NGFFYVLDRT
NGKFIRGFPF VDKITWATGL DKDGRPIYND ASRPGAPGSE AKGSSVFVAP AFLGAKNWMP
MAYNKDTGLF YVPSNEWGMD IWNEGIAYKK GAAFLGAGFT IKPLNEDYIG VLRAIDPISG
KEVWRHKNYA PLWGGVLTTK GNLVFTGTPE GFLQAFNAKT GDKVWEFQTG SGVLGSPVTW
EMDGEQYVSV VSGWGGAVPL WGGEVAKRVK DFNQGGMLWT FKLPKQLQQT ASAKP
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