| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3072 |
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| Symbol | |
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| ID | 5194235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3456041 |
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| End bp | 3457408 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587518 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001268384 |
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| Protein GI | 148548282 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.536959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGTG TCACCCTTGC CCAGCAGGTC GCCGATGCGG TTGAGCAGCA GATCCGTACT
GGGGTGCTGA AGGTCGGCGA TCGCCTGCCA TCGCTGCGCG AATACATGCG CTTGCACGGG
CATTCGAAGA ATACGGTGAT AACCGCTTAC GAGATCCTCG CCTCCAAGGG GCTGGTGGAG
GCGCGCCACG GCCAGGGCTT TTTCGTGGGC GCGCAGGTGC AGGCCGCCGA AGTGGATGAG
ACGCCGCCTT ACACCCGGGC AATGGACACT ATCTGGATGA TGCGTCAGCA GTTCGTTCGC
GAACCCGGGC TGGCGCCGCT GGGTGAAGGT TTTGCGCCGG TGGCCTGGCT GCAGGACATG
CGCCTCGACA AATTCACCCG GCAGGCAATG CGCAGTGGCG CTGGCAACCT GTTCCGCTAT
GGCAACCGCC TGGGCAACCC GGGCCTCCGC CAGAGCCTGG TGCGCAAGCT GGCCAGCTAC
GCCATCAGTG CCACGCCCCG GCAGATCGTG ACCACCCACG GCGCCAACCA TGCGCTGGAC
CTGATCATCC GCCGCTTCGT GGTACCGGGC GACGCGGTGC TGGTGGAAAA CCCGGGGTAC
TACCCGCTGT TCGGCAAGCT GCAACTCCAC GGCGCGCGGC TGCTGAGCGT TCCGCGTCTG
GCGGATGGGC CGGACATGGA CGCGCTGGAG TCCATGCTGC GTGTCGAACG GCCCCGCTTG
TTCTTCATCC AGTCGGTGTG CCACAACCCT ACCGGCTCGG ATATCTCCCC GGCCAAGGCT
CACCGCCTGC TGCAACTGGC CGAGCGGCAC GACTTGCTGC TGGTCGAAGA CGATGCCCTG
GCCGACTTCA AGCCCAGCTC TGCGCTCAAG GTGGCGGCGC TCGACCAGTT GCGCCGGTCG
CTGTACATCG GCAGTTTTTC CAAATCGGTG TCGGCGGCCT TGCGGGTGGG TTACATCGCG
GGCAGCAAGG AGGCCATCGA CGAGTTGGCC GACCTGCAGA TGATGCTGCA CACCAGCTGT
TCGGAACTGT GCGAGCGCAC GGCTGATGTG ATCCTCAGCG AAGGGCACTT CCTGCGGCAC
CTGATGCGCC TGCAGGACCG GGTGCGGGAA GCCACTGCCG GTGGGTTGCG GGTGCTGGAC
GAACTAGGGG CCGAAGTGTT CTGCCGGCCG GAACAGAGCC TGTACCTGTG GGCGCGTTTC
CCCGGGATCG AAGATACTGC CGTGCTCACC CGTGAAGTGC AGGGCAGGGG GGTAATGCTG
GCGCCGGGGG CGATCTTCCA GACCAACCAG AAGGCCGTGA CACCCTGGAC CCGGCTGAAC
GTGGCCTATC TGCAAGAGCC GGTGTTTGCC CAGTGCATCC GCGCCTGA
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| Protein sequence | MPRVTLAQQV ADAVEQQIRT GVLKVGDRLP SLREYMRLHG HSKNTVITAY EILASKGLVE
ARHGQGFFVG AQVQAAEVDE TPPYTRAMDT IWMMRQQFVR EPGLAPLGEG FAPVAWLQDM
RLDKFTRQAM RSGAGNLFRY GNRLGNPGLR QSLVRKLASY AISATPRQIV TTHGANHALD
LIIRRFVVPG DAVLVENPGY YPLFGKLQLH GARLLSVPRL ADGPDMDALE SMLRVERPRL
FFIQSVCHNP TGSDISPAKA HRLLQLAERH DLLLVEDDAL ADFKPSSALK VAALDQLRRS
LYIGSFSKSV SAALRVGYIA GSKEAIDELA DLQMMLHTSC SELCERTADV ILSEGHFLRH
LMRLQDRVRE ATAGGLRVLD ELGAEVFCRP EQSLYLWARF PGIEDTAVLT REVQGRGVML
APGAIFQTNQ KAVTPWTRLN VAYLQEPVFA QCIRA
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