Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3052 |
Symbol | |
ID | 5190587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3435272 |
End bp | 3435772 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640587498 |
Product | redoxin domain-containing protein |
Protein accession | YP_001268364 |
Protein GI | 148548262 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0678] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAA CCGGCGATCA ACTGCCCGAC GTTACCCTTT ATCAATACAA CAGCGACGCA GGCGCCTGCG CGATCGGCCC AATGGCCTTT TCCATTCGCG AGCGTTGCAA GCACAAGAAG GTGCTGATAT TCGCGTTGCC GGGCGCGTTC ACGCCGACGT GCTCTGAACG TCATGTTCCC GGTTATGTCG CGGCGGCCCC TGCGTTATTC GCGGCTGGCA TTGACGAAAT CCTGTGCGTC TCGGTGAACG ATGCCTTTGT CATGAACGCC TGGGGCAACA GCATGCAGGT CGGGGATGCG GTCAAGATGA TCGGCGATGG CAATGGCGAA TTCAGCGAGG CGCTGGGCCT GACCCAGGAC CTTTCGGCAC GCGGTTTGGG GCGGCGCTCG CAGCGGTATG CAATGTTGGT CGATGACCAG GTAGTCCAGT ACATCGCGGT TGAAAGCCCC GGCAAGTTCG AGGTCAGTGA TGCGGCCAGC CTGCTGGCTG TGTTGCGCTA G
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Protein sequence | MIKTGDQLPD VTLYQYNSDA GACAIGPMAF SIRERCKHKK VLIFALPGAF TPTCSERHVP GYVAAAPALF AAGIDEILCV SVNDAFVMNA WGNSMQVGDA VKMIGDGNGE FSEALGLTQD LSARGLGRRS QRYAMLVDDQ VVQYIAVESP GKFEVSDAAS LLAVLR
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