Gene Pput_3052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3052 
Symbol 
ID5190587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3435272 
End bp3435772 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content60% 
IMG OID640587498 
Productredoxin domain-containing protein 
Protein accessionYP_001268364 
Protein GI148548262 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0678] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAA CCGGCGATCA ACTGCCCGAC GTTACCCTTT ATCAATACAA CAGCGACGCA 
GGCGCCTGCG CGATCGGCCC AATGGCCTTT TCCATTCGCG AGCGTTGCAA GCACAAGAAG
GTGCTGATAT TCGCGTTGCC GGGCGCGTTC ACGCCGACGT GCTCTGAACG TCATGTTCCC
GGTTATGTCG CGGCGGCCCC TGCGTTATTC GCGGCTGGCA TTGACGAAAT CCTGTGCGTC
TCGGTGAACG ATGCCTTTGT CATGAACGCC TGGGGCAACA GCATGCAGGT CGGGGATGCG
GTCAAGATGA TCGGCGATGG CAATGGCGAA TTCAGCGAGG CGCTGGGCCT GACCCAGGAC
CTTTCGGCAC GCGGTTTGGG GCGGCGCTCG CAGCGGTATG CAATGTTGGT CGATGACCAG
GTAGTCCAGT ACATCGCGGT TGAAAGCCCC GGCAAGTTCG AGGTCAGTGA TGCGGCCAGC
CTGCTGGCTG TGTTGCGCTA G
 
Protein sequence
MIKTGDQLPD VTLYQYNSDA GACAIGPMAF SIRERCKHKK VLIFALPGAF TPTCSERHVP 
GYVAAAPALF AAGIDEILCV SVNDAFVMNA WGNSMQVGDA VKMIGDGNGE FSEALGLTQD
LSARGLGRRS QRYAMLVDDQ VVQYIAVESP GKFEVSDAAS LLAVLR