Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3045 |
Symbol | |
ID | 5190240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3428651 |
End bp | 3429448 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640587491 |
Product | exodeoxyribonuclease III |
Protein accession | YP_001268357 |
Protein GI | 148548255 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0213415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCGC TGAAGATTGC CACCTTCAAC ATCAATGGCA TCCGCAGCCG TTTGCCGGCG CTGCTGGCCT GGCTGGAGCG GGAGCAGCCC GACATTGCCT GCCTGCAGGA GCTGAAGGCG GCCGATCAGC AGTTCCCTCG CGCGGAGCTG GAGGCAGCAG GCTATGGCAG CCTTCATCAT GGGCAACCGT CATGGAACGG CGTGGCCATT CTGGTGCGGG GCAGTGATCC GCTTGAGGTT CGCCGCGGCT TGCCCGGCCT GGAAGAGGAC AGCCAGAGCC GCTATCTGGA AGCGGCAGCA CACGGGGTGT TGGTCGCTTG CCTCTACCTG CCGAACGGCA ATCCGCAGCC CGGGCCCAAG TTCGATTACA AGCTGCACTG GTTCGAATGC CTGATCCAGC ATGCGCGCAG CCTCTATGAA AGTGGCCACC CCACGCTGCT GGCAGGGGAT TTCAATGTCG TGCCCACCGA CATGGACATC TATAACCCGC GTTCCTGGCT GAAGGACGCA CTGCTGCAGC CTGAGTCGCG AGCGTGTTAC CAACGACTGC TTGATCAGGG CTGGCTCGAT GCCATACGCC ATCTGTACCC GGACGAGCGT GTCTACACCT TCTGGGACTA TTTCCGTAAC CACTGGGCCC GCAATGCCGG GTTGCGGATC GACCACCTGT TGCTCAACCC CGAGCTTGCG CCTTATCTGA AGCGGGCGGG TGTCGATGCG TGGGTGCGTA ACGAGGCCAA GGCCAGCGAC CATGCACCCG TCTGGATCGA GCTGGGCACG CGTCGTGCCC GGTCATAG
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Protein sequence | MKALKIATFN INGIRSRLPA LLAWLEREQP DIACLQELKA ADQQFPRAEL EAAGYGSLHH GQPSWNGVAI LVRGSDPLEV RRGLPGLEED SQSRYLEAAA HGVLVACLYL PNGNPQPGPK FDYKLHWFEC LIQHARSLYE SGHPTLLAGD FNVVPTDMDI YNPRSWLKDA LLQPESRACY QRLLDQGWLD AIRHLYPDER VYTFWDYFRN HWARNAGLRI DHLLLNPELA PYLKRAGVDA WVRNEAKASD HAPVWIELGT RRARS
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