Gene Pput_3045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3045 
Symbol 
ID5190240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3428651 
End bp3429448 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content63% 
IMG OID640587491 
Productexodeoxyribonuclease III 
Protein accessionYP_001268357 
Protein GI148548255 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0213415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGC TGAAGATTGC CACCTTCAAC ATCAATGGCA TCCGCAGCCG TTTGCCGGCG 
CTGCTGGCCT GGCTGGAGCG GGAGCAGCCC GACATTGCCT GCCTGCAGGA GCTGAAGGCG
GCCGATCAGC AGTTCCCTCG CGCGGAGCTG GAGGCAGCAG GCTATGGCAG CCTTCATCAT
GGGCAACCGT CATGGAACGG CGTGGCCATT CTGGTGCGGG GCAGTGATCC GCTTGAGGTT
CGCCGCGGCT TGCCCGGCCT GGAAGAGGAC AGCCAGAGCC GCTATCTGGA AGCGGCAGCA
CACGGGGTGT TGGTCGCTTG CCTCTACCTG CCGAACGGCA ATCCGCAGCC CGGGCCCAAG
TTCGATTACA AGCTGCACTG GTTCGAATGC CTGATCCAGC ATGCGCGCAG CCTCTATGAA
AGTGGCCACC CCACGCTGCT GGCAGGGGAT TTCAATGTCG TGCCCACCGA CATGGACATC
TATAACCCGC GTTCCTGGCT GAAGGACGCA CTGCTGCAGC CTGAGTCGCG AGCGTGTTAC
CAACGACTGC TTGATCAGGG CTGGCTCGAT GCCATACGCC ATCTGTACCC GGACGAGCGT
GTCTACACCT TCTGGGACTA TTTCCGTAAC CACTGGGCCC GCAATGCCGG GTTGCGGATC
GACCACCTGT TGCTCAACCC CGAGCTTGCG CCTTATCTGA AGCGGGCGGG TGTCGATGCG
TGGGTGCGTA ACGAGGCCAA GGCCAGCGAC CATGCACCCG TCTGGATCGA GCTGGGCACG
CGTCGTGCCC GGTCATAG
 
Protein sequence
MKALKIATFN INGIRSRLPA LLAWLEREQP DIACLQELKA ADQQFPRAEL EAAGYGSLHH 
GQPSWNGVAI LVRGSDPLEV RRGLPGLEED SQSRYLEAAA HGVLVACLYL PNGNPQPGPK
FDYKLHWFEC LIQHARSLYE SGHPTLLAGD FNVVPTDMDI YNPRSWLKDA LLQPESRACY
QRLLDQGWLD AIRHLYPDER VYTFWDYFRN HWARNAGLRI DHLLLNPELA PYLKRAGVDA
WVRNEAKASD HAPVWIELGT RRARS