Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3038 |
Symbol | |
ID | 5191017 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3422249 |
End bp | 3423613 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640587484 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001268350 |
Protein GI | 148548248 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCGC TACGCCAGCG TACGCTGTGG CGCGTGATGC TCTTGCTGCT ACTGGGCACC GGCCTGCTCG CGCTCTATAA CTACCATGAC AGCAGCCACG AAATTAACGA GGTGTATGAC GCGCACCTGG CCCAGAACGC GCGTTTGCTG CAAGGCGTCA TGAGCATGCC GGTACAAGAG GGCTCGCGTG AGGCGCTGTA TCAGGCCTTC AACGATGCCT TGGGCAAAGC GGGGCGGCAC CAGGTGGGGC ACCCTTACGA AAGCAAGCTG GCATTCCAGG TCTGGGGTGA AGGCATGGCG TTGCTGGTGC ATACACCCAG TGCGCCGCCC ATTGACCCAC CACCCACTGC TCCAGGGTTC TACGACTTTT CCAGTGGCGG TGAACAATGG CGCGGGTTCG TTTTGCCGGT GCCGGAAAAG CACTGGCTTA TCTGGGTGGG TGAGCGTGAT GATGTGCGCT ACGACCTGAT CGACCGCATC GTTCGCCACA CGCTGTTCCC GTTCCTGCTT GGCAGCCTGG CGTTGGCACT GCTGGTGTGG GCTGCGATCG GCTGGGGGCT GCGGCCACTG CAGAACATGG CCAATGTCAT CCGCAGGCGC CATGCCGATT CGCTGGAGCC GCTGCAACTG GTACCGCTTC CCACTGAACT GGAGCCCATG CAGGCGGCCA TCAATCGCTT GCTGGCGCAG ATCGACGATC TGCTGCGGCG TGAGCATCGC TTCATTGCCG ATGCTGCCCA CGAAATGCGT ACGCCTCTTG CCGTACTGCG GCTGCACGCG CAGAACGCGC TGGCCGCCAG CAATGATGCC GAGCGCCAGA AAGCCCTGGG CTTTCTTGTG GGCGGGGTCG ATCGGCTGAC ACGGGTGGTC AACCAATTGC TGACATTGGC CCGCGTCGAG CCAAGACTGG GGCAGCGAGC CAGTACCCGG ATCGACCTGG CCGAGGTCGT CACCGAAACC CTGGCTGAAC TCACCCCATG GATACTGGAC CGTGGCCTGG AACCCTCGCT GGACATTGAC GAAGGGGACC ACCACCTGCA GATCGACGCC GGCGCGCTGG GCATTGCGCT ACAGAACCTG GTGTCCAACG CGGTAGAACA CTCACCGCCT GGGGGGCGCA TCGCCGTGTC ACTGCGGCGT CTGGACAGCA GCATAGAACT GGTCGTCGAG GATGAAGGGA CGGGTATCGA TGAGGAGAGC CTGTCCCGTG TATTCGAGCG CTTTTACAGC CGAAACAGCC CAAATGGTGC TGGCCTCGGG CTGTCCATCG TCGCGACCAT CATCGACCGT ATGGGGGGGC AGGTACGCCT TGAAAACAGA GCGGGCAGCG GGCTGGCCGC TACCTTGTCG TTTCCACTGT CTTGA
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Protein sequence | MSSLRQRTLW RVMLLLLLGT GLLALYNYHD SSHEINEVYD AHLAQNARLL QGVMSMPVQE GSREALYQAF NDALGKAGRH QVGHPYESKL AFQVWGEGMA LLVHTPSAPP IDPPPTAPGF YDFSSGGEQW RGFVLPVPEK HWLIWVGERD DVRYDLIDRI VRHTLFPFLL GSLALALLVW AAIGWGLRPL QNMANVIRRR HADSLEPLQL VPLPTELEPM QAAINRLLAQ IDDLLRREHR FIADAAHEMR TPLAVLRLHA QNALAASNDA ERQKALGFLV GGVDRLTRVV NQLLTLARVE PRLGQRASTR IDLAEVVTET LAELTPWILD RGLEPSLDID EGDHHLQIDA GALGIALQNL VSNAVEHSPP GGRIAVSLRR LDSSIELVVE DEGTGIDEES LSRVFERFYS RNSPNGAGLG LSIVATIIDR MGGQVRLENR AGSGLAATLS FPLS
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