Gene Pput_3038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3038 
Symbol 
ID5191017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3422249 
End bp3423613 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content62% 
IMG OID640587484 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001268350 
Protein GI148548248 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTCGC TACGCCAGCG TACGCTGTGG CGCGTGATGC TCTTGCTGCT ACTGGGCACC 
GGCCTGCTCG CGCTCTATAA CTACCATGAC AGCAGCCACG AAATTAACGA GGTGTATGAC
GCGCACCTGG CCCAGAACGC GCGTTTGCTG CAAGGCGTCA TGAGCATGCC GGTACAAGAG
GGCTCGCGTG AGGCGCTGTA TCAGGCCTTC AACGATGCCT TGGGCAAAGC GGGGCGGCAC
CAGGTGGGGC ACCCTTACGA AAGCAAGCTG GCATTCCAGG TCTGGGGTGA AGGCATGGCG
TTGCTGGTGC ATACACCCAG TGCGCCGCCC ATTGACCCAC CACCCACTGC TCCAGGGTTC
TACGACTTTT CCAGTGGCGG TGAACAATGG CGCGGGTTCG TTTTGCCGGT GCCGGAAAAG
CACTGGCTTA TCTGGGTGGG TGAGCGTGAT GATGTGCGCT ACGACCTGAT CGACCGCATC
GTTCGCCACA CGCTGTTCCC GTTCCTGCTT GGCAGCCTGG CGTTGGCACT GCTGGTGTGG
GCTGCGATCG GCTGGGGGCT GCGGCCACTG CAGAACATGG CCAATGTCAT CCGCAGGCGC
CATGCCGATT CGCTGGAGCC GCTGCAACTG GTACCGCTTC CCACTGAACT GGAGCCCATG
CAGGCGGCCA TCAATCGCTT GCTGGCGCAG ATCGACGATC TGCTGCGGCG TGAGCATCGC
TTCATTGCCG ATGCTGCCCA CGAAATGCGT ACGCCTCTTG CCGTACTGCG GCTGCACGCG
CAGAACGCGC TGGCCGCCAG CAATGATGCC GAGCGCCAGA AAGCCCTGGG CTTTCTTGTG
GGCGGGGTCG ATCGGCTGAC ACGGGTGGTC AACCAATTGC TGACATTGGC CCGCGTCGAG
CCAAGACTGG GGCAGCGAGC CAGTACCCGG ATCGACCTGG CCGAGGTCGT CACCGAAACC
CTGGCTGAAC TCACCCCATG GATACTGGAC CGTGGCCTGG AACCCTCGCT GGACATTGAC
GAAGGGGACC ACCACCTGCA GATCGACGCC GGCGCGCTGG GCATTGCGCT ACAGAACCTG
GTGTCCAACG CGGTAGAACA CTCACCGCCT GGGGGGCGCA TCGCCGTGTC ACTGCGGCGT
CTGGACAGCA GCATAGAACT GGTCGTCGAG GATGAAGGGA CGGGTATCGA TGAGGAGAGC
CTGTCCCGTG TATTCGAGCG CTTTTACAGC CGAAACAGCC CAAATGGTGC TGGCCTCGGG
CTGTCCATCG TCGCGACCAT CATCGACCGT ATGGGGGGGC AGGTACGCCT TGAAAACAGA
GCGGGCAGCG GGCTGGCCGC TACCTTGTCG TTTCCACTGT CTTGA
 
Protein sequence
MSSLRQRTLW RVMLLLLLGT GLLALYNYHD SSHEINEVYD AHLAQNARLL QGVMSMPVQE 
GSREALYQAF NDALGKAGRH QVGHPYESKL AFQVWGEGMA LLVHTPSAPP IDPPPTAPGF
YDFSSGGEQW RGFVLPVPEK HWLIWVGERD DVRYDLIDRI VRHTLFPFLL GSLALALLVW
AAIGWGLRPL QNMANVIRRR HADSLEPLQL VPLPTELEPM QAAINRLLAQ IDDLLRREHR
FIADAAHEMR TPLAVLRLHA QNALAASNDA ERQKALGFLV GGVDRLTRVV NQLLTLARVE
PRLGQRASTR IDLAEVVTET LAELTPWILD RGLEPSLDID EGDHHLQIDA GALGIALQNL
VSNAVEHSPP GGRIAVSLRR LDSSIELVVE DEGTGIDEES LSRVFERFYS RNSPNGAGLG
LSIVATIIDR MGGQVRLENR AGSGLAATLS FPLS