| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3011 |
|---|
| Symbol | |
|---|
| ID | 5190275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3401855 |
|---|
| End bp | 3402214 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640587457 |
|---|
| Product | protein of unknown function DUF861, cupin_3 |
|---|
| Protein accession | YP_001268323 |
|---|
| Protein GI | 148548221 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3450] Predicted enzyme of the cupin superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCAGA AACTGACCGT GTTCCGCGAA CTGGATATCC AACCGCTGCG CGACCTTCCG
TTTTTTGAAG AAGTCCTGGA AGGTACCCCT CACACGCTGA CGTCCAAGTA CTATCACGAT
GAACAGCAAG GTCGCATTTC CGGAGAATGG GAAGCCAGCA CCGGGGCGTG GCGCATTGAC
TACAAAGTCT GGGAGTTCTG CCACGTCCTG AGTGGATGCT GCGTCATCGA GCTTGAGGGT
TGCGCCCCGG TCACACTGGC CGCTGGCGAC ACGTTCATTA TCGAACCGGG CGCCAAGGGC
AAATGGACCG TAGTGGAAGA CATGAAGAAG AACTTCGTGA TCCTCGTGCC CGCGAACTAA
|
|---|
| Protein sequence | MNQKLTVFRE LDIQPLRDLP FFEEVLEGTP HTLTSKYYHD EQQGRISGEW EASTGAWRID
YKVWEFCHVL SGCCVIELEG CAPVTLAAGD TFIIEPGAKG KWTVVEDMKK NFVILVPAN
|
|---|
| |