| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3002 |
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| Symbol | |
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| ID | 5191129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3392254 |
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| End bp | 3393654 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587448 |
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| Product | ABC-type branched-chain amino acid transport systems periplasmic component-like protein |
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| Protein accession | YP_001268314 |
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| Protein GI | 148548212 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTTG ACCCGACCGC GGGAAAGGAG GTTTTCACCC CAGCACAAGA AGTTCACACC
ATGCGCAAAC CCTTGCATCG TCACCTGCTC GTCAGCCTCT TTGTGCTCGG CGCCCAGGCC
CTGTCTCCGG TCGTCACCCA GGCCGCCGAC AACCAGCAGT TCATTCCCAT GGCCACCTAC
CGGGTCGGCG CCTATGCCTC CAGCGGGATT CCCTGGTGGG CCGGAGAGAT CGACTACTTC
CGTTACATCA ACGAGGTGGA AGGCGGCATC AACGGCGTCA AGCTGGTCTG GCAGGAGTGC
GAGACCGAGT GGAACGTCGA CCGTATCGTC GAGTGCTACG AGCGCTACAA AGATGGCAAG
GATGGCGCGC CGACGGCGTT CTTCTTCACC CACAGCACTC CGGGCTCCTA TGCGCTGATG
GAGAAGGGCG CGGCCGACCG CATCCCGCTG ATCGATGGTG CCGGCGGGCG CACCGAGTCT
ACCGACGGCA GCGTGTTCCC CTATGCCTTT CCACTGCTGC TGAACTACTA CGGGCAGGCC
TCGGTGGGCA TCAACTACAT CGCCGAGCGC GAGGGCGGCT TCGACAAGCT CAAGGGCAAG
AAGATCGTCA CCGTCTACCA CGACTCGGCG TATGGCCGGG AAACCCAAGC GCCGATGAAG
CTGCTGGCGG AAACATACGG CTTCGAGAAC ATCCAGATCC CGGTGGCCGA TCCGGGCAAT
GAGCAGTCGG CGCAGTGGCG CCAGGTGCGG CAGATCAAGC CAGATTGGGT GTTCCTGCGT
ACCTGGGGCG TGTCCACTCC GGTTGGCATA AAGACGGCCG CACGCTTCGG CATCCCGGTC
GAGCGCATCA TCGGCGACGT CTGGGCCGGC TCCGAGGCCG ACGTGCTCCC TGCAGGCACG
GCGGCCAAGG GCTACCAGGC CCTGGCGCCG TTCCCCGGTG GCGACGGTTT CGAGATTCAC
CAGCGCCTGC GCCAGCACAT CCTCGATGCC GGCAAGAGCG ACCTGAAGGA TAAGCGCTAC
TTCGGCAAGG TTTACTACAA CATCGGCCTG ATCAATGCCG CGATTGCCGT CGAGGCGCTG
CGCACCGCCC AGGGCAAGTT TGGCAACCGC CCGCTCAATG GTGAGGAAGC GCGCTGGGGC
TTCGAGCACC TGAATATCGA CGCCGCGCGC CTCAAGGCCA GTGGCTTCGA AGGGCTGCTG
CCACCGCTGC AGCTGTCCTG CTCTGATCAC GAGGGCGGTG GTGCGGCCCG CGTTCAGCAG
TGGGACGGTG AGAAATGGGT GCTGGTGACC GACTGGATCC AGGCCGACCG CACCACCTTG
CGTCCGCTGA TCGAGGCCAA GTCCGCCGCC TATGCCCAGG AGAAGGGCAT CACCCCGCGT
AATTGCGCCA ACGAGCAATA A
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| Protein sequence | MNLDPTAGKE VFTPAQEVHT MRKPLHRHLL VSLFVLGAQA LSPVVTQAAD NQQFIPMATY
RVGAYASSGI PWWAGEIDYF RYINEVEGGI NGVKLVWQEC ETEWNVDRIV ECYERYKDGK
DGAPTAFFFT HSTPGSYALM EKGAADRIPL IDGAGGRTES TDGSVFPYAF PLLLNYYGQA
SVGINYIAER EGGFDKLKGK KIVTVYHDSA YGRETQAPMK LLAETYGFEN IQIPVADPGN
EQSAQWRQVR QIKPDWVFLR TWGVSTPVGI KTAARFGIPV ERIIGDVWAG SEADVLPAGT
AAKGYQALAP FPGGDGFEIH QRLRQHILDA GKSDLKDKRY FGKVYYNIGL INAAIAVEAL
RTAQGKFGNR PLNGEEARWG FEHLNIDAAR LKASGFEGLL PPLQLSCSDH EGGGAARVQQ
WDGEKWVLVT DWIQADRTTL RPLIEAKSAA YAQEKGITPR NCANEQ
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