| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2960 |
|---|
| Symbol | |
|---|
| ID | 5190333 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3341744 |
|---|
| End bp | 3342109 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640587406 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001268272 |
|---|
| Protein GI | 148548170 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.437612 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAAC TTGCCGAATT TAAAGCACTG GAAGCGCAAC TGGCCGCGCA ACTTCAACAG
CTGGATGCGA TGAAAAACGA TTCTGGCCTG AAGCAGGAAA TTGAGTTTGA ACAGAAGCTG
AAGGCTTTGC TGGAAGAATA CGGCATGAGC CTGCGTCAGG TGATCACCAT TCTGGATCCG
TCCAAAGGCG TAAGCGTGAG CGCCGCAAGC GCGTCGAGTG GCGCTCAGCG CAAGCCACGC
GAGGTCAAGC GCTACAAGAA CCCGCACAGC GGCGAGGTCG TGGAAACCAA GGGTGGCAAT
CACAAGATCC TCAAGCAGTG GAAGCAGGAA CACGGCTCGG ATACCGTCGA GAGCTGGCTG
CAGTAA
|
|---|
| Protein sequence | MSKLAEFKAL EAQLAAQLQQ LDAMKNDSGL KQEIEFEQKL KALLEEYGMS LRQVITILDP
SKGVSVSAAS ASSGAQRKPR EVKRYKNPHS GEVVETKGGN HKILKQWKQE HGSDTVESWL
Q
|
|---|
| |