| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2901 |
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| Symbol | |
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| ID | 5194459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3291372 |
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| End bp | 3292754 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640587349 |
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| Product | aromatic hydrocarbon degradation membrane protein |
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| Protein accession | YP_001268215 |
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| Protein GI | 148548113 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2067] Long-chain fatty acid transport protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.875359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.623789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CAATATACAG CTTAAGTGCC TGCGGCATTT TGACGTGCTT GTACTGTGGT
ATTGCGTCTG CAACAGATGC TTTCAACCTC GTCGGGGTTG GACCGGTTTC CCAAGGTATG
GGGGGGATTG GTGCAGCCTT CAATATCGGG GCACAAGGTA TGATGCTGAA CCCGGCAACG
CTTACTCAGA TGCAAGAAGG TATGCATCTG GGGCTGGGAA TGGACATCAT TACTGCGGAA
TTGGAAGTCA AGAATACCGC TACCGGCGAA AAAGCCGACT CCCATAGTCG TGGGCGCAAC
AACGGGCCTT ACGTGGCGCC TGAGCTTTCT TTGGTGTGGC GTGGTGAGCG ATATGCGCTG
GGAGTCGGTG CTTTTGCTTC CGATGGGGTT GGAACCCAGT TTGGAGACAC CAGCTTTCTC
TCGCGTACCA CGACCAATAA TCTTAATACA GGGCTGGAAA ACTACTCCCG TCTGATAGTT
TTGCGGATAC CGTTCTCTGC GGCTTACCAG GTGAACGAGA AGTTGTCCGT CGGGGCATCG
TTGGATGCTG TGTGGACGTC GGTGAACTTG GGACTCCTAC TGGATACCAC ACAGATTGGT
ACATTGGTTG GACAAGGCCA GGTGTCCGGC TCATTGATGC CAGCGTTGCT GAGCGTGCCG
GAGCTGTCGG CAGGTTATCT ATCCGCGGAC AATCACCGTG CCAGCGGTGG TGGCGTGGAC
TCCTGGGGCA TAGGTGGCCG GCTTGGTCTG ACCTATCAGT TGACCCCAAA AACACGGGTG
GGGATTGTAT ACAACTTCAA GACCCATGTT GGAGACCTGT CTGGCAATGC CGATTTGACG
GCAGTAAGCG CTGTCGCGGG TAATATCCCT CTCTCGGGTG AACTCAAGCT ACATAACTTC
GAGATGCCAG CATCTCTCGT TGCGGGCATC AGTCACGAAT TCAGTGATCA GTTTGCTGTT
GCGTTCGACT ACAAGCGTGT CTACTGGAGC GATGTCATGG ATGACATAGA AGTCAACTTC
AAGCAGAAAG CCACGGGCGA CACTATCAAT CTGAAACTGC CTTTCAATTA TCGGGACACC
AACGTGTATT CGTTGGGAGC GCAATACCGC TACGGTGCGA ACTGGGTGTT TCGAGCGGGC
GTGCACTATG CCCAACTGGC CAACCCTTCA AGTGGTACAA TGCCAATCAT TCCTTCGACA
CCGACTACCA GTCTCTCGGG AGGCTTTTCA TATGCCTTCA GCCCTGAGGA TGTAGTCGAT
TTTTCTCTGG CCTACGGATT CAAGAAGAAA GTATCCAATG ACAGCCTGCC GATCACCGAC
AAGCCCATCG AAGTATCGCA TTCGCAGATA GTTACATCGA TTTCCTATAC CAAGAGTTTC
TAG
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| Protein sequence | MKKTIYSLSA CGILTCLYCG IASATDAFNL VGVGPVSQGM GGIGAAFNIG AQGMMLNPAT
LTQMQEGMHL GLGMDIITAE LEVKNTATGE KADSHSRGRN NGPYVAPELS LVWRGERYAL
GVGAFASDGV GTQFGDTSFL SRTTTNNLNT GLENYSRLIV LRIPFSAAYQ VNEKLSVGAS
LDAVWTSVNL GLLLDTTQIG TLVGQGQVSG SLMPALLSVP ELSAGYLSAD NHRASGGGVD
SWGIGGRLGL TYQLTPKTRV GIVYNFKTHV GDLSGNADLT AVSAVAGNIP LSGELKLHNF
EMPASLVAGI SHEFSDQFAV AFDYKRVYWS DVMDDIEVNF KQKATGDTIN LKLPFNYRDT
NVYSLGAQYR YGANWVFRAG VHYAQLANPS SGTMPIIPST PTTSLSGGFS YAFSPEDVVD
FSLAYGFKKK VSNDSLPITD KPIEVSHSQI VTSISYTKSF
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