| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2867 |
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| Symbol | |
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| ID | 5195373 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3254778 |
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| End bp | 3255983 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640587316 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001268182 |
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| Protein GI | 148548080 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.966 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGGCCA TGCATTGTGA TTCCCAAAAG ATCAGTTCTA CAACCAGGAG ACGAACGGTG
AGACTCGAGC GAGCTTTGCG TGCGAGACAG TTAATTCCGC TAGCAGCCAT CTGGTTGCTG
GTGGGTTGCG GTAAGCAGGA AACGGTGGAA AGCACTGCGG TGCCTCCCGA AGTTGGGGTC
TATACCGTGA AGGCCCAAGC ACTGACCCTG ACCACGGACC TGCCCGGACG CACCTCGGCC
TACCGAGTCT CCGAAGTGCG TCCTCAGGCC TCCGGCATTC TGCAGAAACG CATGTTCGTA
GAGGGCGCAG AGGTGAAGCA GGGTGAGCAG TTGTACCAGA TCGACCCGCG CACCTACGAG
GCGCTGTTGG CCCGTGCCGA GGCGAGCCTG TTGACCGCGC AGAATCTCGC CCGCCGTTAT
GAGCGCCTGC TCGACACCAA CGCGATCAGC CAGCAGCAGT ACGACGACGC AATGGCCACC
TGGAAGCAGG CGCAGGCCGA GGCCCAGATG GCGCGTATCA ACATGCAGTA CACCAAGGTG
CTGGCACCGA TTACCGGCCG CATCGGGCGT TCGGCCGTCA CTGAAGGCGC ACTGGTGACC
AATGGGCAAG CGCAGGAGTT GGCCACCGTT ACCCAACTCG ATCCGATCTA TGTTGACGTC
AATCAGCCTA TCACCAGGCT GCTGGGCCTC AAACGTGCCT TGGAGTCAGG ACGCCTGCAG
CGCGTTGGGG ATAATCAGGC TCAAGTCAGC CTTACCCTCG ATGACGGCAC ACCCTACCCG
CTCAAAGGAG TACTCAAGTT CTCCGAGGTT AGCGTCGCCC CCTCCACCGG CTCGGTCACC
CTGCGTGCCG AGTTCCCCAA TCCTGATCAC AAACTGCTAC CGGGCATGTT CGTCCATGCA
CTGCTCAATG AGGGCGAGCA ACAGGCAGCC ATTCTGGTTC CCCATCAGGC CGTGGGCCGT
GATGCGCGGG GAGTGCCTAC CGTATGGGTG GTTAAGCCAG ATAACACCGT GGAATCGCGT
GAAGTGCAAA CCTTGCAGAC CGTAGGCAAC GCCTGGTTAC TAGGTGCGGG TATCAATGAT
GGCGAGCGGG TGATTACCGA GGGCGTCCAG CTGGCCCGCT CAGGTATCAC GGTTAAGCCT
GTTGCCGCCA AGAACGTCAA GCTGATGAGC GAATTCGGCT CACAGGTGCA AGCCCAGGCC
CATTGA
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| Protein sequence | MRAMHCDSQK ISSTTRRRTV RLERALRARQ LIPLAAIWLL VGCGKQETVE STAVPPEVGV
YTVKAQALTL TTDLPGRTSA YRVSEVRPQA SGILQKRMFV EGAEVKQGEQ LYQIDPRTYE
ALLARAEASL LTAQNLARRY ERLLDTNAIS QQQYDDAMAT WKQAQAEAQM ARINMQYTKV
LAPITGRIGR SAVTEGALVT NGQAQELATV TQLDPIYVDV NQPITRLLGL KRALESGRLQ
RVGDNQAQVS LTLDDGTPYP LKGVLKFSEV SVAPSTGSVT LRAEFPNPDH KLLPGMFVHA
LLNEGEQQAA ILVPHQAVGR DARGVPTVWV VKPDNTVESR EVQTLQTVGN AWLLGAGIND
GERVITEGVQ LARSGITVKP VAAKNVKLMS EFGSQVQAQA H
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