Gene Pput_2817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2817 
Symbol 
ID5192627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3197389 
End bp3198273 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content63% 
IMG OID640587267 
Producthypothetical protein 
Protein accessionYP_001268133 
Protein GI148548031 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.813656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACTCA AGGACCTGCT TATCGCCCTG GTGGTGATTG TCGCCTGGGG CGTCAACTTT 
GTGGTCATCA AGGTTGGCCT CGACGGGCTG CCACCGATGT TGCTGGGGGC ATTGCGTTTC
TTGCTGGTGG CGTTTCCGGC GATCTTGCTG GTCAGGCGGC CCAAACTGCC GTGGCGCTGG
CTGATCGCTT ACGGTGCGAC CATTTCACTG GGCCAGTTCG CGTTCCTGTT TCAGGCCATG
TACAGCGGCA TGCCGCCAGG ATTGGCTTCG TTGATCCTGC AGTCGCAAGC CTTCTTCACC
CTCGGTTTTG CGGCGTTGTT TCTCGGTGAG CGGCTGCGCC TGGCCAGCGT GCTGGGGCTG
CTGGTGGCGG CCGGCGGCCT GGCACTGATC GGCAGCGAAG ACGGCGGCCA TGTGCCCATG
CTGGCGTTGG TGCTGACCCT GTGTGGCGGT GCAATGTGGG GCCTGGGCAA CATCATTACC
CGGCGGTTCG GCTCGGTCGA CCTGGTCGCG TTGGTGATCT GGGGTGGGCT GATCCCGCCA
CTGCCATTCC TGGCACTGTC CTGGTGGCTG GAAGGCCCCG AGCGCATTGG CCATGCCTTG
GCCAATATCA GTTGGAGTTC GGTGCTGGCC CTGGCGTATT TGGCCTTTGT GGCCACCATG
CTCGGCTACA GCCTGTGGAG TAAGTTGCTG TCGCGTCACC CGGCAGGCAA AGTGGCGCCG
TTCTCGCTGC TGGTACCGGT GATTGGCCTG AGTTCGTCGG CGTTGCTACT GGGAGAGCGC
CTGACCGCTA CGCAGGGCTG GGGCGCATTG TTGGTGATGG CCGGCCTGCT GGTGAATGTA
TTCGGTGCGC GCATCGGTCA GCGTTTGCGG GCTGCCAACG CGTAA
 
Protein sequence
MPLKDLLIAL VVIVAWGVNF VVIKVGLDGL PPMLLGALRF LLVAFPAILL VRRPKLPWRW 
LIAYGATISL GQFAFLFQAM YSGMPPGLAS LILQSQAFFT LGFAALFLGE RLRLASVLGL
LVAAGGLALI GSEDGGHVPM LALVLTLCGG AMWGLGNIIT RRFGSVDLVA LVIWGGLIPP
LPFLALSWWL EGPERIGHAL ANISWSSVLA LAYLAFVATM LGYSLWSKLL SRHPAGKVAP
FSLLVPVIGL SSSALLLGER LTATQGWGAL LVMAGLLVNV FGARIGQRLR AANA