Gene Pput_2804 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2804 
Symbol 
ID5190257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3187598 
End bp3188131 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content66% 
IMG OID640587254 
Productcytochrome B561 
Protein accessionYP_001268120 
Protein GI148548018 
COG category[C] Energy production and conversion 
COG ID[COG3038] Cytochrome B561 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.850837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.374097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTC AAGCCTTCCA CCCTTTCGCC CGCGTGTTGC ACTGGCTGAT GGCCGTGCTG 
ATTCTGGCCA TGCTGTTCAT CGGCGTAAGC ATGGTCGCCG ACCTGTCGCT ACGCCACCCG
GTGCTGATCA GCCTGCACAA AGCCACCGGG CTGGCCCTGC TGGTGCTGGT GGTACTGCGC
ATTGCTGTGC GCCTGACCCT ACCTCACCCG CCCCTGCCGA ACGATCTGCC AAAACTGCAG
CGCTGGGCCG CCGGAGCCTC GCATCTGCTG CTTTATGGCC TGATGCTGGC CATGCCGCTG
CTGGGCTGGG CCATGCTGTC GGCAGGCGAT TACCCGCGCC CGCTCGGCTT GCCCGCCATC
GCCCCCCACA ACCTGCAGCT ATATGCTGTG TTGCGCCAGG CCCATGGCTG GGCCGGCTAC
CTGCTGTTCG CCACGGTGCT GGTGCATGTG GGGGCCGCTT TGATGCATGC GTGGGTGCGC
CGTGACGGTG TGTTGCGTAG CATGTGGCCT GGCCCCTTGC ACCGCAGCGA GTGA
 
Protein sequence
MKPQAFHPFA RVLHWLMAVL ILAMLFIGVS MVADLSLRHP VLISLHKATG LALLVLVVLR 
IAVRLTLPHP PLPNDLPKLQ RWAAGASHLL LYGLMLAMPL LGWAMLSAGD YPRPLGLPAI
APHNLQLYAV LRQAHGWAGY LLFATVLVHV GAALMHAWVR RDGVLRSMWP GPLHRSE