| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2801 |
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| Symbol | |
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| ID | 5193122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3185154 |
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| End bp | 3185906 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640587251 |
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| Product | putative transmembrane anti-sigma factor |
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| Protein accession | YP_001268117 |
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| Protein GI | 148548015 |
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| COG category | [K] Transcription |
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| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.261643 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGCC TGATCCCCAG CGATGACGAA TTGCACGCTT ACGTCGATGA GCGCCTGGAA
CCTGTGCGCC GGGCCGAAGT GCAGGCCTGG CTGGCGGCCA ACCCGCAAGC TGCGGCACGG
GTGGAAGGCT GGCGCGCCGA TGCCCGGCGG CTGCGCACAG CGCTGGCCGG ATTGGGCGAG
CTGCCCGGTG CGGCGCAGCT GGACCTTGGC CAGTTGCGTC GGCAATTGCG CCAGCGTCGG
CAGCGGCGTT GGGCGGCGGC GGCGGTGGTG ATGCTGGCGT TGGGTGTGGG GGGCTTGGGC
GGCTGGCAAG TGCGCGATGC AACCTTGGCG CGGGTCGACC TGCCCATGGC TGATGCTGTT
CAGGCGCACC GTTTGTTCGC CAGCAGTGAA GCACTGGATA TCCAGGCCAG TGATCCTGGG
CAGTTACGTG ACTGGCTGGG CCGCCATTTC AGCCGGGTGG GCCAGTTACC GGACCTGGCG
GGGTATGGCT TCAAACCGGT GGGCGCCCGC CTGCTCAGCA ACGAGCAGGG GCCGGCTGCA
TTACTGGTAT TCGAAGATGG CAAGGGCCAG CGCATCAGCC TGTTCCTGCG CTCGCCGGGC
GACCTTTATC GGCGCATGCC GGACGGGCAG CGGGTCGATG GACAGCTGGA GGCGCGGTAC
TGGTCGCATG GGGCTTATAA CTTTGCCTTG GTCAGCGCGG CGGACGATGT GCGTGGGGCG
GGGGTGGGGG AGGCGTTGAG GTTGGGGTTG TGA
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| Protein sequence | MKRLIPSDDE LHAYVDERLE PVRRAEVQAW LAANPQAAAR VEGWRADARR LRTALAGLGE
LPGAAQLDLG QLRRQLRQRR QRRWAAAAVV MLALGVGGLG GWQVRDATLA RVDLPMADAV
QAHRLFASSE ALDIQASDPG QLRDWLGRHF SRVGQLPDLA GYGFKPVGAR LLSNEQGPAA
LLVFEDGKGQ RISLFLRSPG DLYRRMPDGQ RVDGQLEARY WSHGAYNFAL VSAADDVRGA
GVGEALRLGL
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