| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2787 |
|---|
| Symbol | |
|---|
| ID | 5192039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3169020 |
|---|
| End bp | 3170723 |
|---|
| Gene Length | 1704 bp |
|---|
| Protein Length | 567 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640587237 |
|---|
| Product | glutaminyl-tRNA synthetase |
|---|
| Protein accession | YP_001268103 |
|---|
| Protein GI | 148548001 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGC CCACTGCCGA CAACGCGCCC AACGCCGCTG CCAAAGGCGC CCCCGCTGTC
CCTGCGAACT TCCTGCGGCC GATCATCCAG GCCGACCTGG ACTCGGGCAA GCACAGCAGT
ATCGTCACCC GTTTCCCGCC GGAGCCCAAT GGTTATCTGC ACATCGGCCA CGCCAAGTCG
ATCTGCGTCA ACTTCGGCCT GGCCAAGGAA TTCGGCGGCG TCTGCCACCT GCGCTTCGAC
GATACCAACC CGGCCAAGGA AGACCAGGAG TACATCGACG CCATCCAGAG CGATGTGAAG
TGGCTGGGCT TCGACTGGGC CGGCGACGTG CGCTATGCCT CCGACTATTT CGACCAGTTG
CATGACTGGG CGGTCGAGCT GATCAAGCGC GGCAAGGCCT ACGTCTGCGA CCTCACCCCT
GAGCAAGCCA AGGAATACCG CGGCAACCTC AAGGAGCCGG GCAAGAACAG CCCGTTCCGC
GAGCGTAGCG TGGAAGAAAA CCTCGACCTG TTCGCCCGCA TGAAGGCTGG CGAATTCCAG
GACGGCGAGC GTGTGCTGCG GGCCAAGATC GACATGGCCT CGCCAAACAT GAACCTGCGT
GACCCTATCC TGTACCGCAT TCGCCATGCC CACCACCACC AGACCGGCGA CAAGTGGTGC
ATCTACCCCA ACTACGACTT CACCCACGGC CAGTCGGATG CCATCGAGGG CATTACCCAC
TCGATCTGCA CCCTGGAGTT CGAAGGGCAT CGTCCGCTGT ACGACTGGTT CCTCGACAAC
CTGCCGGTGC CGGCACACCC GCGCCAGTAC GAGTTCAGCC GCCTGAACCT GAACTACACC
ATTACCTCCA AGCGCAAGCT CAAGCAGCTT GTGGACGAGA AGCACGTCGA CGCCTGGGAC
GACCCACGCA TGTCGACCCT GTCCGGCTTC CGTCGCCGTG GCTACACGCC GGCTTCGATC
CGCAACTTCT GCGAAATGAT CGGCACCAAC CGCTCCGACG GTGTGGTCGA CATGTCGATG
CTCGAGTTCA GCATCCGTGA CGACCTGGAC CGCACCGCGC CACGCGCGAT GTGTGTGCTG
CGCCCGCTGA AAGTGGTCAT CACCAACTAC CCTGAAGGCC AGGTCGAGCA GCTTGAGCTG
CCACGTCACC CGAAGGAAGA CATGGGCGTG CGTGTGCTGC CGTTCTCCCG CGAGCTGTAC
ATCGACCGCG ACGACTTCAT GGAAGAACCG CCGAAGGGCT ACAAGCGCCT GGAACCGGCC
GGTGAAGTGC GCCTGCGCGG CAGCTACGTG ATTCGTGCTG ACGAAGCCAT CAAGGACGCC
GACGGCAATA TCGTCGAACT GCGCTGCTCG TACGACCCGG ACACCCTCGG CAAGAACCCG
GAAGGCCGCA AGGTCAAAGG TGTGATCCAC TGGGTTCCGG CTGAAGGCAG CGTCGAATGC
GAAGTGCGCC TGTACGACCG CCTGTTCCGC TCGCCCAACC CGGAAAAGAC CGAGGAGGGC
GGTAGCTTCC TCGACAACAT CAACCCGGCT TCGCTGCAAG TGCTCAGCGG TTGTCGTGCC
GAGCCGTCGC TGGCACAGGC GCAGCCCGAG GACCGCTTCC AGTTCGAGCG CGAAGGCTAC
TTCTGCGCCG ACCTGAAAGA CAGCCAGCCG GGCCGCCCGG TGTTCAACCG CACTGTCACC
CTGCGTGACT CCTGGGGCAG CTGA
|
|---|
| Protein sequence | MSKPTADNAP NAAAKGAPAV PANFLRPIIQ ADLDSGKHSS IVTRFPPEPN GYLHIGHAKS
ICVNFGLAKE FGGVCHLRFD DTNPAKEDQE YIDAIQSDVK WLGFDWAGDV RYASDYFDQL
HDWAVELIKR GKAYVCDLTP EQAKEYRGNL KEPGKNSPFR ERSVEENLDL FARMKAGEFQ
DGERVLRAKI DMASPNMNLR DPILYRIRHA HHHQTGDKWC IYPNYDFTHG QSDAIEGITH
SICTLEFEGH RPLYDWFLDN LPVPAHPRQY EFSRLNLNYT ITSKRKLKQL VDEKHVDAWD
DPRMSTLSGF RRRGYTPASI RNFCEMIGTN RSDGVVDMSM LEFSIRDDLD RTAPRAMCVL
RPLKVVITNY PEGQVEQLEL PRHPKEDMGV RVLPFSRELY IDRDDFMEEP PKGYKRLEPA
GEVRLRGSYV IRADEAIKDA DGNIVELRCS YDPDTLGKNP EGRKVKGVIH WVPAEGSVEC
EVRLYDRLFR SPNPEKTEEG GSFLDNINPA SLQVLSGCRA EPSLAQAQPE DRFQFEREGY
FCADLKDSQP GRPVFNRTVT LRDSWGS
|
|---|
| |