Gene Pput_2713 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2713 
Symbol 
ID5190513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3088866 
End bp3089384 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content61% 
IMG OID640587165 
Productuncharacterized peroxidase-related enzyme 
Protein accessionYP_001268031 
Protein GI148547929 
COG category[S] Function unknown 
COG ID[COG2128] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.805371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGAA TTACCGCTCT CTCGCTGGAC CAGGCCCCTA CTGGCTCACG CGCAGCCCTC 
GAAGGCATTC AAAAAGGTCT CGGCTTCATT CCCAACGCAT TCAAGACCCT GGCGCACGCT
CCGGTCGCGC TCAATGGTTA CCTGGGCCTC GCCCAAGCGT TGGGTAAAAG CTCACTGAGC
GCCGCCGAGC GTGAAGTCGT TGCCCTGGCC ACTTCGGAAA TCAACGGGTG CGACTACTGC
CTGGCTGCAC ACACCTTCTT CGGCGGCAAG GCGGGTTTGA GCGATGAGGC CGTAAGCCAA
GCCCGAGCCG GCACACTCAG CGCGGTTGCC GCACTGGCGC AGCAGATCAC GGCAAGGCGC
GGCCAGTTGA GTGACGAGCA GATCGCTGCC GCGCGTGAGG CAGGGCTTAC TGATAGCAAG
ATCGTGGAGG TGGTGGCACA GGTCACGCTG TTAACCCTGA CCAACTACCT GAACAACATC
GCCGCTACCG ATATCGACTT TCCGCCATCG GCAAACTAG
 
Protein sequence
MTRITALSLD QAPTGSRAAL EGIQKGLGFI PNAFKTLAHA PVALNGYLGL AQALGKSSLS 
AAEREVVALA TSEINGCDYC LAAHTFFGGK AGLSDEAVSQ ARAGTLSAVA ALAQQITARR
GQLSDEQIAA AREAGLTDSK IVEVVAQVTL LTLTNYLNNI AATDIDFPPS AN