| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2690 |
|---|
| Symbol | |
|---|
| ID | 5192264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3067238 |
|---|
| End bp | 3067675 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640587142 |
|---|
| Product | 3-dehydroquinate dehydratase |
|---|
| Protein accession | YP_001268008 |
|---|
| Protein GI | 148547906 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0757] 3-dehydroquinate dehydratase II |
|---|
| TIGRFAM ID | [TIGR01088] 3-dehydroquinate dehydratase, type II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCCA ATGTACTGAT GCTGCATGGC ATCAACCACA ACATGTTCGG CAAGCGCGAC
CCGCGCCAGT ACGGCACAGC GACCCTGGCC GACATCGACC AGGCGTTGCA AGCCCTGGGC
GAAGAGCTGG GGGCGCAGGT CGTGAGCTTC CAGAGCAACT TCGAGGGCGC CCTGTGCGAA
CGCATCCATC AGGCCTATGA GGACCGGGTG GATGCGGTGC TGATCAATGC CGGTGCCTGG
ACGCATTACA GCTACGGCAT TCGTGATGCA TTGGCCATTA TCGAAGTGCC GGTGGTAGAA
GTGCACATGT CCAACATCCA TGCCAGGGAG CCGTTCCGCC ATCACTCGGT ATTTGCCGAG
GTGGTGCGCG GGCAGATCTG CGGGTTTGGT GTCGAAACCT ACCTGCTGGC GCTGCGTGCG
GCGATGAGCA TGGTCTGA
|
|---|
| Protein sequence | MVANVLMLHG INHNMFGKRD PRQYGTATLA DIDQALQALG EELGAQVVSF QSNFEGALCE
RIHQAYEDRV DAVLINAGAW THYSYGIRDA LAIIEVPVVE VHMSNIHARE PFRHHSVFAE
VVRGQICGFG VETYLLALRA AMSMV
|
|---|
| |