Gene Pput_2687 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2687 
Symbol 
ID5191679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3064306 
End bp3064998 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content67% 
IMG OID640587139 
Producthypothetical protein 
Protein accessionYP_001268005 
Protein GI148547903 
COG category[S] Function unknown 
COG ID[COG5343] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCCG ATTCTGCCGA AGAACTGGAC AGCCTCGCCG GGGAATATGT GCTGGGGACC 
TTGTCGCCGG AGCAATATGC CGCGGCGGCC GAACGCCTGC GTACCGACCC CGCGCTTCGC
GCCGCCGTGG ATGCCTGGGA GGCCCGGCTG CTGGAGCTGA CCGCGCTGTC TACCCCGCAG
CCCCCAAGCC CCCGCCTGTG GCGCCGTATC CAGCGCAGCC TCGACGAGCT GCCCGCACCG
CACACGCAGG CTCGCTGGTG GCAACGCCTC GGCCTGTGGC AAGGGCTCAG CGCCGCAGGG
CTGGCTGCAA GCCTGCTGCT GGCGTTTACC TTGCTGACAA CGCCCCCCTC TAACACGCAA
TACCTGGTGG TGCTGGTGGC GCCGAACAGC CAGGCCCCCG GCTGGGTGGT GCAGGCCAGC
GACAGCCACA TGATCGAACT GCTGCCGCTG GGCCGGGACA CGGTCCCCGA CGGCATGGCC
CTGCAGTTCT GGACCAAGGG CGAGCAATGG CGTGCTCCGG TTTCGCTTGG CCTGGTCAAA
CCGGGCGAAC CCTATCGAGT TCCGCTGGAA AGTTTGCCAC CCTTGGAGGC CAATCAACTG
TTCGAGCTGA CGCTGGAGAA AGCCGGTGGC TCGCCGACCG GTCTGCCGAC AGGGCCGGTG
AAGTTCATTG GTCGCGCGGT GAAAGTGATA TGA
 
Protein sequence
MKPDSAEELD SLAGEYVLGT LSPEQYAAAA ERLRTDPALR AAVDAWEARL LELTALSTPQ 
PPSPRLWRRI QRSLDELPAP HTQARWWQRL GLWQGLSAAG LAASLLLAFT LLTTPPSNTQ
YLVVLVAPNS QAPGWVVQAS DSHMIELLPL GRDTVPDGMA LQFWTKGEQW RAPVSLGLVK
PGEPYRVPLE SLPPLEANQL FELTLEKAGG SPTGLPTGPV KFIGRAVKVI