Gene Pput_2671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2671 
Symbol 
ID5191614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3053582 
End bp3054613 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content65% 
IMG OID640587123 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001267989 
Protein GI148547887 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCC TCGTCCGCGC CGCCAGCTTG ACCAACTACC TGGAGGTGTC TCGCCACCTG 
GGTCTGAACC CCCACAAACT GCTGGCACAG GTGGGCCTCA GCGCGGCGTT GCTTAACGAC
CCCAACCGGC GTATCCCGGT GGCCAGCGTG ATCAACCTGC TGGAAGCTTC CGCCAGCGCC
AGCCAATGCG AGAGCTTCGG CTTGCGCATG GCCGAACTGC GCCAGTTGTC GGACTTCGGC
GAAATCAGCC TGCTGCTCAG CCACCAACGC AACCTGCGCG ATGCGCTGCA GGTGATCGTG
CAGTACCGCC ATCTGCTCAA TGACGCGCTG GCCATTCATA TCGAAGAAGC TGGCAAGACC
GTGGTCATTC GCGAAGAGGT GATCAGCGAG CGCGCGCCCT GTAGCCGCCA GGCCACCGAG
CTGGCTATCG GCGTGATGAT GCGCTTGTGC GCGGCGCTGC TAGGCACGCA CTGGCACCCG
ATCAGCGCCA ATTTCACCCA TGCGGCCCCC GCCGACCCCG CCATTCACCG GCGCATTTTC
GGCTGCACGC TGGTGTTTGG CAGCGAGTTC AACGGCATCG TCTGCCCTGC CGCCGACCTC
GACAGTGCCA GCCCGCAAGC CAACGAAGCC ATGGCCCGGC TGGCGCGGCG CTACCTGGAC
ACGCTGCCAG CAGGCAGCGA ACCATCGCTG GAGCTGGAGT TGCGCAAGAC CATCTACCTG
CTGCTGCCCA TGGGGCGGGC CACCCTCGAG CAAGTGGCGC AAACCCAGGG CATGAACGTA
CGCACGCTGC AGCGGCGGCT GGAGGAAAGC GGGTTGACCT TCAAGGACCT GATCAACAGC
GTGCGACGTG ACCTGGTGAT GCGCTACCTG GAGAACCCCA GCTATTCGCT GGGTCGCATT
GCCGATATGC TCGGCTACTC GATGCCCAGT TCGTTCACCC GCTGGTTCAT CGCCCAGTAC
GGCATGCCGC CGGCCAGCTG GCGGGCAAGC AGTGTCAGCC CTGCTCCCCA AACCCGTCAC
TATCGAGGGT GA
 
Protein sequence
MPALVRAASL TNYLEVSRHL GLNPHKLLAQ VGLSAALLND PNRRIPVASV INLLEASASA 
SQCESFGLRM AELRQLSDFG EISLLLSHQR NLRDALQVIV QYRHLLNDAL AIHIEEAGKT
VVIREEVISE RAPCSRQATE LAIGVMMRLC AALLGTHWHP ISANFTHAAP ADPAIHRRIF
GCTLVFGSEF NGIVCPAADL DSASPQANEA MARLARRYLD TLPAGSEPSL ELELRKTIYL
LLPMGRATLE QVAQTQGMNV RTLQRRLEES GLTFKDLINS VRRDLVMRYL ENPSYSLGRI
ADMLGYSMPS SFTRWFIAQY GMPPASWRAS SVSPAPQTRH YRG