| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2633 |
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| Symbol | |
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| ID | 5195358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3007117 |
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| End bp | 3009612 |
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| Gene Length | 2496 bp |
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| Protein Length | 831 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640587085 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001267951 |
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| Protein GI | 148547849 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3523] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03348] type VI secretion protein IcmF |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGC TCAAGTACTA CTGCCTGCGC TACCAACCCT ACCTGCTGGG CGTGGCGTTC
TTCCTGGCGA TCTTCCTGGT CTGGGCCATC GGCCGAGCCT TCGGCTTCGC CTCGCTGCAC
AGCCTGCTGG CCGGGATCGG CGTGTTTCTG CTGCTGTCGG CGGGCTATGT ACTGCTGCTG
TACCGCGGCG TGGGTCAGCA CCACAACCTT GAAGGCCTGC TGCGGGACGA CGCCGACCAG
GCCGTACTCA GTGCAGCCCC GGCCGACCGG GAAGAAGTCA GCCTGTTGCG CGAGCGCCTG
CTGCAGGGCA TCGAGCGCCT GCACAGCAAC AAGCCGCGCG GTACTTCGAA CAAGGATGCC
CTGTATGCCC TGCCCTGGTA CCTGGTCATT GGCCAGCCTG CCGCCGGCAA GAGCACGATG
ATTTTGCAGT CGGGCCTTAA CTTCCCCTAT GCCGAGCGCG AAGGCGTGCG GGTCGCGGGC
CTGGGCGGCA CGCGCAACTG CGACTGGTTC TTCAGCTCTG AAGCGGTACT GCTGGACACT
GCCGGGCGCT ACATGAACAG CCCCGAGGAA GCCGGCAAGT GGCGCGGCTT TTTGCAAATG
CTGCGCCAGC ACCGCCAGCG CCGTCCCCTT AATGGCTTGA TTGTCAGCGT CAGCATCGCC
GATATCCTGC ATGGTTCGGT CGAAGACCAG GAGCGCGTGG CCAAGCGCTT GCGCGAACGC
ATTCAGGAAA GCTGCGCGCT GCTGGAAGTG CGTCTGCCAA TCTACCTGGT TTTCACCAAA
TGCGACCTGA TCCCTGGTTT CACCGCGTTC TATCGCCAAC TGGACGACGC GGCTCGTGGT
GAAGTGATGG GTAAAACCTT CTCTCACAAG GGTTACGAGC AAGCCGACTG GGGCCAGCGC
TTCAGCAATG CGATGGACGA GCTGACGCGT TACTGGGGGC AGATGGCGAG CCAGCAGCTG
GTGCAGCAGG ACATACAAGT CACCCGGCGG AACGACGCTG CCTACCGCTT CCCGCTGGAG
CTGGCCGCGC TCAAGCCGCG CCTGCATCAG TTCGTCGACA GCCTGCTGCG TGCCAACCCT
TACCAGAATG CCGAAATGCT GCGCGGTTTC TATTTCACCG CGGCGCTGCA GGCCGACGAG
GCTCAGTGGG GCTGCCACGG CCAGCATGTG GCCGAACGCT TCGCGCTCGA ACACGCAGAA
GGAACGGGCA CTGCCGGCAG CCAGCCGGCG CCGCTGTTCA TCAACAGCCT GTTCCGCAAA
GTGATCATTC CCGACCAGCA TTTGGTGGCG CTGTACACCA GCAACCACCG TGAACGCCGG
CGCAAGGCCG GGTGGGTGGG CGCTGCCGGC CTGGCGGCAC TGGTGCTGTG CAGCCTGTGG
GGCTGGTCGT ACCTGAACAA CCGCGCCACC CTGGCCAGCA TTGCCGACGA ACTGGCCCAG
GCCAAGGCCG ACGACCAGGC GGCCAGCGGC CAGTACACCG CCTGGCGAAG CCTCGACCGC
TTGCGCTTCT GGGCTGCTCA CTACCATGAG CAACACCACG CTAAGGGCGT GCCCCTCAGC
ATGCGCCTGG GCCTGTACCA GGGCCATGAG GTCGAGCCGC TGCTGCGCAA CCGCTACTTC
GCCACGTTGC AGAATGTAAT GCTAAAGCCC ACGGCCGATA ATCTGACCCG TACCCTGTAC
CTGCTGACCA CGCTCAAGGT CTACCAGCGC AACACCCGTG AGCTGCAGCC AGTGAGCGGC
ATTGACAGCG TAGAGGCCGA GGCGCTGCCC CATGACAACC GCGCCCAGTC GATCGCCAAT
TTCGGAAAGG CGGCCCTGGA CACTTACGTG ATGCTTTCTC CGGGCCAGCG CGAGCATGCC
GACCCGGCGT TTCTCAAGGC GCACCTGCCG GACTACTGGT ACCCGGCCAT CGCCCGCCAT
ACCGGCAAAA GCATGGCCGC CGCCGGCAGC GAGGCCGGTG GCAACCAGGA CTACCTGTAT
GCCAGCCGCC AGATCACGTT CTACAGCGAC CAGATCCGTG AGCCAGATGT ACCGCGCATC
CTCGACAACG CCTTCCTGAT GTCCAGTTCG CGCAACTACA TCGACAGCCT GCGGGCCCAG
TCACTGCGTG CCATCGAGAC CATCACGCTG GAGTCCGACA CCCTGTTCGC CTTCGGCCGC
GCCGACTTCC AGAGCCTGAA AAACGAAGGC CAGCATCAGC TGAGCGCAAT TGCCAGCAAG
CTGCTGAACA CCCCGAATAT CGGCAAGATC ATCATCTCGG GGCACGCCGA CCAACTGGGT
GACAGCCAGG GCAACCTGCA GGTTTCGAAA CAACGGGCGC AAACCATCCG CACCTATCTG
GTTGGCAAGG GCGTACCTGC CGAGCTGGTG GTCGCGCAGG GCGAAGGCAG CCGCAAGCCA
TTGGTCAACT GCGACATGCA ACAACCGCGA ACGCAGTTGA TCAAGTGCCT GGAGCCCAAC
CGCCGGGTGG AAATCGAAGT GCGTGGGCTT AACTGA
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| Protein sequence | MNKLKYYCLR YQPYLLGVAF FLAIFLVWAI GRAFGFASLH SLLAGIGVFL LLSAGYVLLL
YRGVGQHHNL EGLLRDDADQ AVLSAAPADR EEVSLLRERL LQGIERLHSN KPRGTSNKDA
LYALPWYLVI GQPAAGKSTM ILQSGLNFPY AEREGVRVAG LGGTRNCDWF FSSEAVLLDT
AGRYMNSPEE AGKWRGFLQM LRQHRQRRPL NGLIVSVSIA DILHGSVEDQ ERVAKRLRER
IQESCALLEV RLPIYLVFTK CDLIPGFTAF YRQLDDAARG EVMGKTFSHK GYEQADWGQR
FSNAMDELTR YWGQMASQQL VQQDIQVTRR NDAAYRFPLE LAALKPRLHQ FVDSLLRANP
YQNAEMLRGF YFTAALQADE AQWGCHGQHV AERFALEHAE GTGTAGSQPA PLFINSLFRK
VIIPDQHLVA LYTSNHRERR RKAGWVGAAG LAALVLCSLW GWSYLNNRAT LASIADELAQ
AKADDQAASG QYTAWRSLDR LRFWAAHYHE QHHAKGVPLS MRLGLYQGHE VEPLLRNRYF
ATLQNVMLKP TADNLTRTLY LLTTLKVYQR NTRELQPVSG IDSVEAEALP HDNRAQSIAN
FGKAALDTYV MLSPGQREHA DPAFLKAHLP DYWYPAIARH TGKSMAAAGS EAGGNQDYLY
ASRQITFYSD QIREPDVPRI LDNAFLMSSS RNYIDSLRAQ SLRAIETITL ESDTLFAFGR
ADFQSLKNEG QHQLSAIASK LLNTPNIGKI IISGHADQLG DSQGNLQVSK QRAQTIRTYL
VGKGVPAELV VAQGEGSRKP LVNCDMQQPR TQLIKCLEPN RRVEIEVRGL N
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