| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2628 |
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| Symbol | |
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| ID | 5195415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2999606 |
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| End bp | 3000328 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587080 |
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| Product | hypothetical protein |
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| Protein accession | YP_001267946 |
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| Protein GI | 148547844 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3521] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03352] type VI secretion lipoprotein, VC_A0113 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.189737 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACACA AGCACATCGT CCTCAAACGC CTGACCGCAG CCGCCTTGCT GGTAGCGCTG
GCCGGCTGCG GGGTCACCGA CCGTATCGGC AAGCGCATGG AAGACAGCTG GGCGGCCGAC
ATGCTGGCCG ACAGCGAAAA GGTCATCCTG ACCTCCGACG GCGGCAACCA GCTCAACCCC
GACGCCGAGG GCAAGCCGCT GTCGGTGGTG ATGCGCGTGT ATCAGCTGAC CGACCTCGAG
CGCTTCGCGG CTACCGATGC CGAGACCCTG TGGGACGCCC CGCAAAAAGC CTTGGGCAAC
ACCCTGGTGG AAACCCGCGA GATCACCCTG CTGCCCGGCA TTGGCCAGAT CGACCAGTGG
CCGCTGGCCA AGAACGCGCG CTACGTCGGC GTGGCGGCGT TCTTCCGCGA TGAGCAGGAC
GCGCGCTGGA AAGTCGCCTT CGACGCCAAC TCGCTGCGCA AGGACGGTAT CTGGTTCTCC
TCCGACGGCC TGCGGGTGCT GGTGGACAAC ACCGAAATCA GCGCCATGCG TGGCGTGGAC
GTACTGAACA AACCACCGAC CGCCGACCAG CTTGCCGCTG CGCAGAAGGC CAAGGATGCC
GACGCGACCC TCACCGACAA GGTGCAGGAC GCGGCCATCG ACAAAGCCAC CGACGCCGCC
AGCCAGTCGG CCAGCAACGC CATGGATTCA ACCTTCAATT CTTTAGTGGA TAGCGTCAAA
TGA
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| Protein sequence | MQHKHIVLKR LTAAALLVAL AGCGVTDRIG KRMEDSWAAD MLADSEKVIL TSDGGNQLNP
DAEGKPLSVV MRVYQLTDLE RFAATDAETL WDAPQKALGN TLVETREITL LPGIGQIDQW
PLAKNARYVG VAAFFRDEQD ARWKVAFDAN SLRKDGIWFS SDGLRVLVDN TEISAMRGVD
VLNKPPTADQ LAAAQKAKDA DATLTDKVQD AAIDKATDAA SQSASNAMDS TFNSLVDSVK
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