Gene Pput_2573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2573 
Symbol 
ID5194778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2931670 
End bp2932422 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content65% 
IMG OID640587026 
ProductWecB/TagA/CpsF family glycosyl transferase 
Protein accessionYP_001267892 
Protein GI148547790 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1922] Teichoic acid biosynthesis proteins 
TIGRFAM ID[TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCAGT GGCAGAATCG CTGGAAGCGT GTGATCGACC AGCTGGAAGT GATCGCTGAT 
GACGCCGCTG TGCAGCGTCT TCTCGACCGC CTGGCTACGC CGGATACGGG CACCGTGCTG
GGCTTCGTCA ACGCCCATGC GATGAACCTG GTGGTGCACG ATGGTGGCTA CAGCCAGGCA
CTGTCGGCCG CAGATGTGCT GCTGCGCGAT GGCGCCGGCA TGGCGATTCT GTATCGCCGC
CTGGGCCTGG AACCTGGGCT GAACATGAAC GGCACTGACT TCATTCCCAG GCTCATGGCT
GCTTACCGAG GGCGCAAGGT CGCCTTCTGG GGCACCCGGC AACCCTACCT GCACCAGGCC
GTGCGGCGCT GTGAAGCCGA GTTCGGCATT GTGCCGGTGT CGGTTCACGA TGGTTTCGCC
AGCCTTGAAA CCTATTTGCA GTTGGCCCGC GAGCAGCAAC CCGAGCTGAT CGTGCTGGGC
ATGGGCATGC CCAAGCAAGA GGCGGTGGCA GCGGAGTTGG CAGTCACTGG CGGGCCATGC
CTGATCGTGT GCGGTGGGGC GATCCTGGAC TTCCTCGGCG GCAAGGTCAG CCGTGCCCCC
GAATGGCTGC GGCGTTTGGG GGGCGAGTGG CTGTACCGCC TGCTGCGCGA ACCCAAGCGC
CTGTTCATGC GTTACGTGGT GGGCAATCCG CTATTCCTGT TGCGCACCCT GCTGTACCGG
CGGGCGGCGG TTTCGGCCAG GCGGGCCCTA TGA
 
Protein sequence
MDQWQNRWKR VIDQLEVIAD DAAVQRLLDR LATPDTGTVL GFVNAHAMNL VVHDGGYSQA 
LSAADVLLRD GAGMAILYRR LGLEPGLNMN GTDFIPRLMA AYRGRKVAFW GTRQPYLHQA
VRRCEAEFGI VPVSVHDGFA SLETYLQLAR EQQPELIVLG MGMPKQEAVA AELAVTGGPC
LIVCGGAILD FLGGKVSRAP EWLRRLGGEW LYRLLREPKR LFMRYVVGNP LFLLRTLLYR
RAAVSARRAL