| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2559 |
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| Symbol | |
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| ID | 5191301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2913769 |
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| End bp | 2915895 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640587012 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001267878 |
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| Protein GI | 148547776 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCA CGTTCGTTTC GCTTTGTGTG CTTCATGCTG TCTCCCCGCT GGCCTTTGCC
GAGCCTGAAC CGCTCAGCGA CCCTAACCCG ATCGAACTCC AGGCCCTGAG CATCACCAGT
ACTGCCGACG GTGAACGCGC CGACGGCCCG GTCGATGGCT ACAAGGCCAC CCGCTCGGCC
AGTGCCACCC GCACCGACAC GGCGCTGCAC GAAACCCCGC AATCGGTCAG CGTGGTGCCC
AAGGATGTGC TGGTAGACAC GGGCGCCACG CGCCTGCAGG ACGGCCTGGA CTACGCCGGG
GGTGTCGGCC GCGCCAACAA CTTCGGCGGC CAGGGGCTGA CAACGTTCAC CGTGCGTGGC
TTCACGACCG GAGAGTTCTA TCGCAACGGC TTTCCGATCA ACCGCGGATA CCCCAATGCT
CCGGATGCCA ACACCGTCGA GCGCCTGGAG GTCATCCGTG GCCCGGCCAG CAGCCTGTAC
GGCCGTGGCG ACCCCGGCGG TACGTTCAAC GTGGTCAGCA AGCAGCCGTT GCCCGAGTCC
AAGGTCACCC TTGGCAGCCA GTTCGACGAC CAGGGCATGC ACCGTGCCAC CCTTGATGCC
ACCGGGCCGC TGAGCCAGGA CGGCTCGCTG GCCTACCGCC TGAACGTACT GGGCGAAGGC
GGCGACAGCT TCCGCGACGA TGTCGAAAGC GAGCGCTACG ATGTCGCTCC GGTCATCAGC
TGGCAGGTCA ATGACGCCAC GAAGATCACC TTCGAAGGCG ATTTCATGCG CAACAACCAC
CCCCTCGATC GCGGCCTGAC CCGCTACCCC ACCCAGACCG GCAGCGCCTC GCGCGATACC
TATATCTGGG AAAAAGGCAG CGACAACCTG CTGCACAATG ACAACAACAT GGCGCAGGTG
CGCTTCGAGC ACCTGCTCAA TGACAACTGG TCGCTGGCTG GCGGGTTCCA GTTCCTCGAT
GGCTCGCTCA AGGGCAACGC TGTCGAAGCC GACGGCGCAC CGGCAGATGG ACGCACGCTG
CAGCGCAACT TCAACTACCG CAAGCTGGAG TGGACCGACC GCGACTGGCA GCTGAACCTG
ACCGGGCATT TTGACACCGG CAATTTCAGC CATACCTTGT TGACCGGGGT CGAATACGAG
AACTACGACT ACAACTCGAT CATCCAGCGT TCCTCGGCAG CCTACCCAAT CGACATCTAC
AACCCGGTAC TGGGCCAGCC GCGTCCGGCC CTGAACCGCA CCACCACCTG GGACAAGGAA
AACCTGCAGA CGTGGGCGTT CTTCATTCAG GACCAAGTGG CCCTGACCGA GCGTTTGAAG
GCATTGGCAG GCGTGCGCTT CGAGCGTTTC GAGCATGACT ATGACAACAA GCTGAACAAT
GCCGGCGATT TCAGCAAGGG CGAAAACGGC GTCACACCCC GCCTTGGCTT GATCTACGAC
CTGACCGATA CCCTGGCGGT CTACGCCAAC ACCGCACGCT CGTTCAAACC CAATACGGGC
ACGCCGGCCA GTGGCGGTGG TTTCGACCCG GAGAAGGGCA AATCCTACGA GCTGGGTGTG
AAATGGGAGT CACTCGACCG CCAGTTGAGT GTCGACGCGG CGATCTACCA CATCGTCAAG
GAAAACGTAC TGACCAACGA CCCGAGCGAC CTTACTGGTA CTTACAAGAT CGCGGCCGGC
GAGGTGCGCA GCCGTGGCCT GGACATCAAC GTCGCCGGCA ACCTCACCCC CGAATGGCGC
ATGATCGGTG GCTATGCCTA CGTGGACGCC GAAGTCACCA AGGACACCAC CCTGCCCAAG
GGAACGCGCC TGGCCAATAT CCCGCGCAGC ACCTTTAGCC TGCTGAACAC TTACGAGTTC
CAGGATGGCC TGGTCAAAGG CCTTGGCCTG GGCGTAGGCG TTAAGTATGT AGACGACCGT
GCCGGGCAGA CATCGGCAGC CACCTACACG ATGGAACGCT ACAGCGTGGT CGACCTGTTG
AGCTTCTATA AGGTCAACGA ACACGTGCGG TTGAACCTGG ACGTGAAAAA CGTGTTCAAC
AAGGGGTATG ACGAAGGGGC GTTCAACAGC TACGTATACC CCGGCGCACC GCGCACGGTG
CAGGCCGGCG TTTCGTATAC CTTCTGA
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| Protein sequence | MRRTFVSLCV LHAVSPLAFA EPEPLSDPNP IELQALSITS TADGERADGP VDGYKATRSA
SATRTDTALH ETPQSVSVVP KDVLVDTGAT RLQDGLDYAG GVGRANNFGG QGLTTFTVRG
FTTGEFYRNG FPINRGYPNA PDANTVERLE VIRGPASSLY GRGDPGGTFN VVSKQPLPES
KVTLGSQFDD QGMHRATLDA TGPLSQDGSL AYRLNVLGEG GDSFRDDVES ERYDVAPVIS
WQVNDATKIT FEGDFMRNNH PLDRGLTRYP TQTGSASRDT YIWEKGSDNL LHNDNNMAQV
RFEHLLNDNW SLAGGFQFLD GSLKGNAVEA DGAPADGRTL QRNFNYRKLE WTDRDWQLNL
TGHFDTGNFS HTLLTGVEYE NYDYNSIIQR SSAAYPIDIY NPVLGQPRPA LNRTTTWDKE
NLQTWAFFIQ DQVALTERLK ALAGVRFERF EHDYDNKLNN AGDFSKGENG VTPRLGLIYD
LTDTLAVYAN TARSFKPNTG TPASGGGFDP EKGKSYELGV KWESLDRQLS VDAAIYHIVK
ENVLTNDPSD LTGTYKIAAG EVRSRGLDIN VAGNLTPEWR MIGGYAYVDA EVTKDTTLPK
GTRLANIPRS TFSLLNTYEF QDGLVKGLGL GVGVKYVDDR AGQTSAATYT MERYSVVDLL
SFYKVNEHVR LNLDVKNVFN KGYDEGAFNS YVYPGAPRTV QAGVSYTF
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