Gene Pput_2547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2547 
Symbol 
ID5191571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2900513 
End bp2901763 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content61% 
IMG OID640587000 
Productouter membrane porin 
Protein accessionYP_001267866 
Protein GI148547764 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.789024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACA CCCCTTGCGT TGCCCTGGGC CTGACACTGC TCAGCCAGCC ACTGCTGGCT 
GCCGAAGGCG GCTTCTTCGA GGACTCGAAG GCCACCCTGA GTGCCCGTAA CTACTACTTC
AGCCGCGATT TTTCCGACAT TGTCGGGGCC AACAAACAGT CCAAGGCCGA GGAGTGGGCC
CAGGGTTTCA TCCTCGACTT CAAAAGTGGC TACACCCCGG GCCCCGTCGG TTTTGGCGTG
GACGCCCTGG GCTTGCTGGG CATCAAGCTG GACAGCAGTC CAGACCGCAC CAACACCGGC
CTGTTGCCGG TGCATGGCGA CGGCCGTGCT GCCGATGAGT ACAGCCGCCT GGCGCCGACC
TTCAAGGCGC GGATATCAAA AACCGAACTG CGTGCAGGTG AACTGCAACC GAACCTGCCG
GTGCTGACCT TCAGTGATAT TCGCCTGTTG CCACCCACCT ATCAGGGCGT GAGTTTGAGT
TCGGCAGAAA TCGACGGGCT GACTATGCAG GCCGGGCACT TGAAAAGCAC CCACCTGCGC
AACGAAGGTG GCGACGGCAA GATGAACGCG ATGCTCGGCC ATGTGCCGAT GCGACAGGCC
GAAAGCGACG CGTTCAACTA TGTGGGAGGG GACTATGCGT TCAATGCCAA CCAGAGCAGC
GTCAGCCTTT GGTACGGTCA GCTGGAGGAC ATCTACCAAC AAGGCTTTGT TGGCCTGAAG
CACAGCAAAC CCGTCGGCGA CTGGGTACTC AGTGCCAACC TGGGTTATTT CACCGCGCGT
GAGCAAGGCG ATGCGCTGCT GGGCAACATC GACAACCAGG CGTTCTTCTC GCTGTTCACT
GCCCGGCATG GCGGGCACAG CTTCCACGCC GGCTACCAGG GCATTTATGG CGATAGCCCG
TTCCCACGGG TATTCGCCAA CATCTCGCCG CTGGGCAACG AGGTGCCGAC CTATGAGTTT
GCCTACACCG ACGAACGTTC GTACCAGGTG CGTTACGACT ACAACTTCGC CGCCATGGGC
GTGCCGGGCC TGACAGCGAC TGTGCGCTAC ATAACCGGCA ACAATGTCGA CACCGGGCTG
GGTTACGAGG GGCGTGACCG CGAGCGTGAC CTGGATATCG GCTATGCGGT GCAGAGCGGG
GCACTGAAAG GGTTGGGGAT TCGGGTGAGG AACGCCATGG CGCGCTCCAA CTACCGCAGT
GATATCGACG AGAACCGCCT GACGCTGGTG TACACCTGGC AGCTGTTCTG A
 
Protein sequence
MNHTPCVALG LTLLSQPLLA AEGGFFEDSK ATLSARNYYF SRDFSDIVGA NKQSKAEEWA 
QGFILDFKSG YTPGPVGFGV DALGLLGIKL DSSPDRTNTG LLPVHGDGRA ADEYSRLAPT
FKARISKTEL RAGELQPNLP VLTFSDIRLL PPTYQGVSLS SAEIDGLTMQ AGHLKSTHLR
NEGGDGKMNA MLGHVPMRQA ESDAFNYVGG DYAFNANQSS VSLWYGQLED IYQQGFVGLK
HSKPVGDWVL SANLGYFTAR EQGDALLGNI DNQAFFSLFT ARHGGHSFHA GYQGIYGDSP
FPRVFANISP LGNEVPTYEF AYTDERSYQV RYDYNFAAMG VPGLTATVRY ITGNNVDTGL
GYEGRDRERD LDIGYAVQSG ALKGLGIRVR NAMARSNYRS DIDENRLTLV YTWQLF