Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2536 |
Symbol | |
ID | 5194010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2887325 |
End bp | 2888365 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640586989 |
Product | SMP-30/gluconolaconase/LRE domain-containing protein |
Protein accession | YP_001267855 |
Protein GI | 148547753 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3386] Gluconolactonase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGTTA CTCACCTGGC CGGTGCGTTG TGCCATCACA CTGATTGCAC CTTGCGCGCC AGCAATAGCC AGCACATCGC CATGCGCTTC AACGAATACA GCAGTGTCAG CTACTCTCGG GACCTCGGCC GTGTGCAGGT GGCCGAGCGC TGGCGCCGCA TCAAGGAATG CAATTACGTG CCGGTCAAAG TGGCCAACAC GCGCGCGGAC CTTGGTGAAA GCCTGGTCTG GGATGAACGC AGCGGCGTGC TGTACTTTGT CGATATCTCT GGCGGGCGCA TCAACTGCCT GGCACCTGAT GGCGAAGTCG ATTGCCTTTA CGAGTCTGCC GCGCGTATTG GCGCCCTGGC GCTGACCGAC CGGGGTAACC TGATTTTCAC CGAGGATGCC AGCGTGGCCA TCTTCGATGT GCCAACACGC AAGGTGAGCC AGCATTCGGC ATCGGTCCAT CCGCGCTCGA CTTACCGCTT CAACGACGGC GCCTGCGACC CTCAGGGACG CTTCGTCACC GGCCTGATGG ACGAGGCCCT CAGCGGCAAT ACCGGGGCGC TTTTTCGCTT TGACTGGCAA TTGAGCGACC AGGTGATTCA CGATGACATG GCTTTGCCCA CCGGCCTTGC CTGGTCTCAG GACGGCCACA CGGTGTACTT CGTCGACTCG GCGGCGCGTG CGATCTACCG CGCCGAGTAC CTCATCGAAG GCCGGCTGGG CGCTGTCACG CTGTTTGCCG AAACCCCCGC CGAACTGGGG CGGCCGGATG GTCTGGCGCT GGACCGCGAC GGCGGGCTGT GGGTGTGCCA GTACCATGGC AGCTGCCTGC TGCGCTACGA CCGCCACGGG TACCTGACCG ACCAGGTGTT GATGCCAGTA CCGTGCCCCA CCAGCTGCTG CTTTGGCGGG CCCGGGATGA ACACCTTGTA CATCAGCACC GCGCGTTACG ACATGACGCC AGAAGACCTG CACCATTATC CGGACGCTGG CGACCTGTAT GCCATTCGCC CGGAAATTGG CGGCGTCGCC AAGTACAGCT TCAAGGAATA A
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Protein sequence | MPVTHLAGAL CHHTDCTLRA SNSQHIAMRF NEYSSVSYSR DLGRVQVAER WRRIKECNYV PVKVANTRAD LGESLVWDER SGVLYFVDIS GGRINCLAPD GEVDCLYESA ARIGALALTD RGNLIFTEDA SVAIFDVPTR KVSQHSASVH PRSTYRFNDG ACDPQGRFVT GLMDEALSGN TGALFRFDWQ LSDQVIHDDM ALPTGLAWSQ DGHTVYFVDS AARAIYRAEY LIEGRLGAVT LFAETPAELG RPDGLALDRD GGLWVCQYHG SCLLRYDRHG YLTDQVLMPV PCPTSCCFGG PGMNTLYIST ARYDMTPEDL HHYPDAGDLY AIRPEIGGVA KYSFKE
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