Gene Pput_2530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2530 
Symbol 
ID5191618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2877707 
End bp2878372 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID640586983 
ProductTenA family transcription regulator 
Protein accessionYP_001267849 
Protein GI148547747 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGG ATATCTTCGA GCGCCTCAAG ACAGCTGCCT CGCCACAATG GAACCGCTAC 
GTAGACCATG ACTTCGTGCG TCAAATGGGC GAGGGCACGC TAAGCGAGGA AGCGTTCCGG
ACCTACCTTG TGCAGGATTA CCTGTTCCTG ATCCAGTTCG CCCGCGCCTG GGCGTTGGCT
GCCTACAAAA GCCGCCGCCC GGCCGACATT CGCGCGGCGC AGGCCGGGCT GGCGGCGATC
CTGGATGAAA CCGAGCTGCA CTTGCGCCTG TGCGCGCGCT GGGGCTTGAC CCAGGCAGAC
ATCGAGGCCG CGCCAGAGCA TCAGGCCACG GTGGCATACA CCCGCTATGT GCTGGACTGC
GGCGCAGCCG GCGACCTGCT GGAGCTGCAC GTGGCACTGG CACCTTGCGT GATCGGCTAT
GCCGAAATCG GCCGGACCCT GGCCGAGCGT ATTGGCGACT TGAGCAATCA CCCCTACCGC
GAGTGGATTG GCGAGTATGC CGGGGAGGGC TACCAAGGGG TGGCCGCAGC AGCGCGCAAG
CACCTGGATG AACTGGCGGC GCGCAGCATG ACCGAGCAGC GGTTCGCCGA ACTGGCAGGG
ATTTTTGGCC AGGCCTCCAG CCTGGAGGCT GATTTCTGGC AAATGGGGTT GGACGGGACC
GTGTAA
 
Protein sequence
MSMDIFERLK TAASPQWNRY VDHDFVRQMG EGTLSEEAFR TYLVQDYLFL IQFARAWALA 
AYKSRRPADI RAAQAGLAAI LDETELHLRL CARWGLTQAD IEAAPEHQAT VAYTRYVLDC
GAAGDLLELH VALAPCVIGY AEIGRTLAER IGDLSNHPYR EWIGEYAGEG YQGVAAAARK
HLDELAARSM TEQRFAELAG IFGQASSLEA DFWQMGLDGT V