| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2480 |
|---|
| Symbol | |
|---|
| ID | 5190528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 2829653 |
|---|
| End bp | 2830972 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640586933 |
|---|
| Product | phenylacetate-CoA ligase |
|---|
| Protein accession | YP_001267799 |
|---|
| Protein GI | 148547697 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1541] Coenzyme F390 synthetase |
|---|
| TIGRFAM ID | [TIGR02155] phenylacetate-CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATGT ACCATGATGC CGATCGTGCC CTGCTGGACC CGATGGAAAC CGCCAGCGTC
GACGCCCTGC GCCAGCACCA GCTGGAGCGT CTGCGTTGGA GCCTGAAGCA CGCCTACGAC
AATGTGCCGC TGTACCGCCA ACGCTTTGCC GAGTGCGGCG CCCACCCCGA TGACCTCAAG
TGCCTGGAAG ACCTGGCGAA GTTCCCCTTC ACCGGCAAGA ACGACCTGCG CGACAACTAC
CCCTACGGCA TGTTCGCCGT GCCCCAGGAA GAAGTGGTGC GCCTGCATGC CTCCAGTGGC
ACCACCGGCA AGCCGACGGT GGTCGGCTAC ACCCAGAACG ATATCGACAC CTGGGCCAAT
GTGGTTGCCC GTTCGATTCG TGCGGCCGGC GGGCGCAAAG GTGACAAGGT GCATGTGTCC
TACGGCTACG GGCTGTTCAC CGGCGGGCTC GGCGCGCACT ACGGCGCCGA GCGCCTGGGC
TGCACCGTGA TCCCCATGTC CGGTGGCCAG ACCGAAAAGC AGGTGCAGCT GATTCGCGAC
TTCCAGCCCG ACATCATCAT GGTCACCCCG TCCTACATGC TCAACCTGGC TGATGAAATC
GAGCGCCAGG GCATCGACCC CCACCACCTC AAGCTGCGCC TGGGCATTTT TGGTGCCGAG
CCGTGGACCG ACGAGCTGCG CCGTTCAATT GAGCAGCGTC TGGGCATCAA TGCCCTCGAT
ATCTATGGCC TGTCGGAGAT CATGGGCCCC GGCGTGGCGA TGGAGTGCAT CGAGACCAAA
GACGGCCCGA CCATCTGGGA AGACCACTTC TATCCCGAGA TCATCGACCC TGCCACCGGC
GAGGTACTGC CGGATGGCCA GCTGGGCGAG CTGGTATTCA CCTCGCTGAG CAAAGAGGCA
TTGCCGATGG TGCGCTACCG CACCCGCGAC CTCACCCGGC TGCTGCCCGG CACCGCTCGG
CCAATGCGGC GGATCGGCAA GATCACCGGC CGCAGTGACG ACATGCTGAT CATTCGCGGC
GTCAATGTGT TCCCGACCCA GATCGAGGAA CAGGTCCTAA AAATAAAACA GCTTTCAGAG
ATGTATGAGA TCCATCTGTA TCGCAATGGA AACCTGGACA GTGTCCAGGT GCATGTGGAA
CTGCGCGCAG AGTGCCAGCA CCTTGACGAA GGCCAGCGCA GGTTGGTTGT CGGGGAGTTG
ACCAAACAGA TCAAGACTTA CATCGGCATC AGCACCCAGG TGCACCTGCA ACCCTGCGGC
ACGCTCAAGC GCTCCGAGGG CAAGGCGTGC CATGTGTTCG ACAAACGGTT GGCCAGCTGA
|
|---|
| Protein sequence | MNMYHDADRA LLDPMETASV DALRQHQLER LRWSLKHAYD NVPLYRQRFA ECGAHPDDLK
CLEDLAKFPF TGKNDLRDNY PYGMFAVPQE EVVRLHASSG TTGKPTVVGY TQNDIDTWAN
VVARSIRAAG GRKGDKVHVS YGYGLFTGGL GAHYGAERLG CTVIPMSGGQ TEKQVQLIRD
FQPDIIMVTP SYMLNLADEI ERQGIDPHHL KLRLGIFGAE PWTDELRRSI EQRLGINALD
IYGLSEIMGP GVAMECIETK DGPTIWEDHF YPEIIDPATG EVLPDGQLGE LVFTSLSKEA
LPMVRYRTRD LTRLLPGTAR PMRRIGKITG RSDDMLIIRG VNVFPTQIEE QVLKIKQLSE
MYEIHLYRNG NLDSVQVHVE LRAECQHLDE GQRRLVVGEL TKQIKTYIGI STQVHLQPCG
TLKRSEGKAC HVFDKRLAS
|
|---|
| |