| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2474 |
|---|
| Symbol | |
|---|
| ID | 5191250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 2823821 |
|---|
| End bp | 2824420 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640586927 |
|---|
| Product | phenylacetic acid degradation protein PaaY |
|---|
| Protein accession | YP_001267793 |
|---|
| Protein GI | 148547691 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
|---|
| TIGRFAM ID | [TIGR02287] phenylacetic acid degradation protein PaaY |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.29781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.884241 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTGCT ATCGACTGGA CGGCCTGACG CCCGTTGTTC ACCCGACAGC CTACGTGCAC
CCCAGTGCAG TCCTGATCGG CGACGTCATC GTCGGCCCCC GCTGCTACAT CGGCCCACTG
GCATCGCTCA GGGGCGATTT CGGCCGCATC GTGCTGGAGG AGGGCGCCAA CTTGCAGGAC
ACCTGCGTGA TGCACGGTTT CCCGGGGGGC GACACCGTAG TAGAGCGTAA CGGGCACATC
GGCCATGGCG CCGTGCTGCA CGGCTGCCGT GTGGGCGAAG ACGCATTGGT CGGCATGAAC
GCCGTGGTGA TGGATGGTGC CCATGTAGCA CCACGCAGCA TCGTCGCGGC CACCGCCTTC
GTCAAAGCTG GCTTCGAAAG CGCGGCGCAG AGCCTGGTGA TGGGGTCGCC AGCCCAGGTC
AAACGCCCAC TGACCGATCA GGAGCTTGCC TGGAAACAGC GCGGGACGGC GGAGTACCAG
CACCTGGCGC AGCGCTGCAT GAACAGCATG GTCGAATGCC CGCCGCTGGC CGAGGCAGAG
CCGGGACGCC CGCGCATGGA AGACACCGGG GTCAGGCCCA AGGGCCAGGC GAGCGCATGA
|
|---|
| Protein sequence | MPCYRLDGLT PVVHPTAYVH PSAVLIGDVI VGPRCYIGPL ASLRGDFGRI VLEEGANLQD
TCVMHGFPGG DTVVERNGHI GHGAVLHGCR VGEDALVGMN AVVMDGAHVA PRSIVAATAF
VKAGFESAAQ SLVMGSPAQV KRPLTDQELA WKQRGTAEYQ HLAQRCMNSM VECPPLAEAE
PGRPRMEDTG VRPKGQASA
|
|---|
| |