| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2472 |
|---|
| Symbol | |
|---|
| ID | 5192300 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 2821542 |
|---|
| End bp | 2822780 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640586925 |
|---|
| Product | membrane protein-like protein |
|---|
| Protein accession | YP_001267791 |
|---|
| Protein GI | 148547689 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3174] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.595236 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.992981 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGACG CCTTGAATGT TGGCCACGGC GCTGTGGCGC TGGGGATTGG CATGCTGGTG
GGGCTGGAGC GCGAGCGTAA GAAGGGGCGT AACGAAGACC ACGCGGCCGC CGGGCTCAGG
ACCTTCGCCA TCACTGCATT GCTGGGCTAC GTCAGCATGT TGCTGGCCGG TGCGGTGCTG
GTCGCGGTGG CGAGTCTGGG CCTGGTGCTG ATGCTCTGCA TGCACTACCG CAGACATGCC
GATAAAGACC CTGAAGTGAC CAGTGAAATT GCCCTGCTGC TGGTGCTGAC ACTCGGGGCG
CTTAGCCTTC ATGAGCCTGA GCTCGCCGCA GCGGTGGGCG TGGTGCTCAC CGTGCTGTTG
GCGCTGCGAC GCGAACTGCA TCATTTCGTG CTGCAACAAT TGAGCGAGGA AGAGCTGCGC
GATGGCCTGA TGTTGTCCAC GGTGGCCTTG GTGGTACTGC CGCTGACACC GGACCAGTTT
CTAGGCCCCT ACAACATACT CAACCCGCGC ACGATTTGTA ACCTGGTGGT CTTGCTGATG
GCCGTGGGTG CTTTAGGACA CATCGTCATG CGCCTGATGG GACCTCGCTA TGGCCTGCCC
TTGAGCGCGA TCGCATCGGG CTTTGCTTCA AGTTCTGCCA CCATTGCCCT GCTTGCGCAC
CGCGTCAGAC AGCAAGGCGC TGCTGCCAGG CCATTTGCCG GCGCTGCCGT ATTGTCCAAT
CTCGCCAGCA TCACCCAATT TGCACTGGTA CTGAGCATCG TCGACCGTCG CTTGCTCGAC
CCTTTCTGGT CATCGATCGC GCTGGGGGCA CTGGTCACAC TCGTGTATGG CGTGCTTCTG
CTAGCCCCTT GGCGTGCTGC TCATGGAGGA TCCGCCACAC ATCCGGGTGA TGGCGCGTTC
AGTCTCTGGA CAGCACTGGC GATCACCGCT GCGATAACCG GCATCGCCTT GTTCTCGGCA
TTTCTGCTTC AGCTTCTGGG CCCCAATGGC GTCAATCTCG CGGCTTTCGT CGGCGGCCTG
GCCGATGCTC ATGCGGCCAC GGCCTCGATC GCCTCGTTGG TCGCTGCCGG ACGAATCAGT
GCGAATGAAA TCGTCATACC GGGGTTGCTC GCAGTGACGG GGAACACATT GAGCAAATGT
GTTCTGGCCT TGAGCAACGG AGGTTTCAGC TTTTCCCGAT ACCTCATTCC AGGGCAACTG
CTCATCCTGG GGGCAATGTG GTTGGGGTTG CTCCTATAG
|
|---|
| Protein sequence | MLDALNVGHG AVALGIGMLV GLERERKKGR NEDHAAAGLR TFAITALLGY VSMLLAGAVL
VAVASLGLVL MLCMHYRRHA DKDPEVTSEI ALLLVLTLGA LSLHEPELAA AVGVVLTVLL
ALRRELHHFV LQQLSEEELR DGLMLSTVAL VVLPLTPDQF LGPYNILNPR TICNLVVLLM
AVGALGHIVM RLMGPRYGLP LSAIASGFAS SSATIALLAH RVRQQGAAAR PFAGAAVLSN
LASITQFALV LSIVDRRLLD PFWSSIALGA LVTLVYGVLL LAPWRAAHGG SATHPGDGAF
SLWTALAITA AITGIALFSA FLLQLLGPNG VNLAAFVGGL ADAHAATASI ASLVAAGRIS
ANEIVIPGLL AVTGNTLSKC VLALSNGGFS FSRYLIPGQL LILGAMWLGL LL
|
|---|
| |