| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2461 |
|---|
| Symbol | |
|---|
| ID | 5195123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 2811101 |
|---|
| End bp | 2811835 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640586914 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001267780 |
|---|
| Protein GI | 148547678 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0543] 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00338238 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.640936 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGCG AGGGTGCCAG CGTTCGCTTG CTCCAGACAT TGCCCGGCCT GGGCATCCAG
CAATTCGTGC GCCTGGCCCT TTGCAGCCAG CCATGCGGCG AGGCAATGGC TGGCCAGTAC
TGCGTGCTCA GTGGTCGTAC CGAGTGCTGG CCGTGCAGTT ACGTGACCCT ACCTGGCGTG
GCCGGGCAAT TTATCGTCAG CACCCAGAGC GCGCAGCCCG TGGGCCGTGC GGGGGAGCTG
CTCGACTATT CCGGGCCGCT TGGCAGCGCT TGGCCGTTGC CCCTGCAAAG CACAAGGTTG
CTGGCCATCA GTCGCGCCGA CGGCCTGCTG CCGTTGTTGG GTGCGCTGGA TGAGATTCGC
TGCTGGCTGC CCTGGTTACA ATTGCAGCTG TCACATGACG GCATTGCGGC CGAACTGCTG
CCAGACGATT GTCGAACCTG GCTGTCGGCA CTGTCGTCAT TGTCGCGTGA CTACAGCAGT
GGCTGGTGGC AGACCAGGCA TTTGCTGACC ACTTTCCGCC CGGACACGGT GTACTGTTGC
GCGCCGCCAC AGGTGGCGCG CCAAGTGGCA CGGTTGTGCT GGCAAACTGG CGTAGCCGCG
CAGCGTATCT GGATACGCAC AGACCATGTG TCACGCCCGA TCTGGGTGGG GCACTCCCCC
GAAAGCTGGC CTGTGCAACG CTATGACCGG GTGCTTGCCG CGCTCAAGTG GGCTCCTCCA
GGCGGGTCAG GTTGA
|
|---|
| Protein sequence | MDREGASVRL LQTLPGLGIQ QFVRLALCSQ PCGEAMAGQY CVLSGRTECW PCSYVTLPGV
AGQFIVSTQS AQPVGRAGEL LDYSGPLGSA WPLPLQSTRL LAISRADGLL PLLGALDEIR
CWLPWLQLQL SHDGIAAELL PDDCRTWLSA LSSLSRDYSS GWWQTRHLLT TFRPDTVYCC
APPQVARQVA RLCWQTGVAA QRIWIRTDHV SRPIWVGHSP ESWPVQRYDR VLAALKWAPP
GGSG
|
|---|
| |